Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., L-arginine ABC transporter, periplasmic substrate-binding component ArtJ/HisJ/ArtI/AotJ/ArgT (from data) from Marinobacter adhaerens HP15

 Score =  181 bits (459), Expect = 1e-50
 Identities = 99/256 (38%), Positives = 151/256 (58%), Gaps = 9/256 (3%)

Query: 3   MKKWLVATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCA 62
           MKK + A +     I+G  QA+E + +R   +  Y PF + + +G L GF+V++A A+C 
Sbjct: 1   MKKMIFAASCALALIAGGAQAQE-RDLRIAFDVPYEPFEYKDENGELTGFEVELAEAMCE 59

Query: 63  EMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKG 122
           EM   C+ V Q WDG+IP LLARK+D I+++MSIT ER ++V F+  Y   P  +   + 
Sbjct: 60  EMNANCEFVIQAWDGMIPGLLARKFDLIMSSMSITPERAERVLFSEPYYNTPGGWFGPES 119

Query: 123 ADLAFT-KEGLKGVKIGVQRATTHDKYITDNYGDTVDIVRYGSFDEAYLDLANGRIAAVL 181
            +   T    ++G  +GVQR TT D Y+T+N G  V I RY + D+  LDL   R+  V 
Sbjct: 120 FNTDVTDMSAMEGKTVGVQRGTTMDTYVTENMGGIVTIKRYTTADDMVLDLEGQRLDVVF 179

Query: 182 GDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALRE 241
            D    E+ +L K G   ++ VG ++      GEG+G+A+R++D +L E+++AA+  L+E
Sbjct: 180 VDYPVGEQTVLTKEG---FKEVGEAVK----LGEGVGVAMRQRDTDLAEEVNAALRTLKE 232

Query: 242 KGIYQQIQAKYFKYDV 257
            G Y  I  KYF YD+
Sbjct: 233 DGTYDTIMQKYFAYDI 248