Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., amino acid ABC transporter permease from Pseudomonas fluorescens FW300-N2E3

 Score =  213 bits (542), Expect = 3e-60
 Identities = 114/239 (47%), Positives = 159/239 (66%), Gaps = 20/239 (8%)

Query: 4   LQGYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPD 63
           LQGY   +L G  +T++++ LSLL++MLLG+LGA AK++P R     AT YTT+IRG+PD
Sbjct: 27  LQGYGPLLLHGTWVTLKLSALSLLVSMLLGLLGAAAKLSPLRLLNLPATFYTTLIRGVPD 86

Query: 64  LVLMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIG 123
           LVLM+LIF+     L   LS   EF+ QW                Y++I PFVAG++T+G
Sbjct: 87  LVLMLLIFYS----LQGWLSSLTEFM-QW---------------PYMEIDPFVAGIVTLG 126

Query: 124 FIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVL 183
           FI+GAY  ETFRGAIL+V +G+ EA  ++G+S    F  ++ PQM+R A+P  GNNWLVL
Sbjct: 127 FIYGAYFTETFRGAILSVPRGQQEAGASFGLSRWQRFYCVVFPQMMRFALPSLGNNWLVL 186

Query: 184 LKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLERKFS 242
           LK TALVSIIGL D+V+++  A  ST     F +  A ++L  TS S  +L++LER+++
Sbjct: 187 LKATALVSIIGLSDLVKVAQEAGKSTFNMLDFLLLAAALYLLITSASNYVLRVLERRYN 245