Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., amino acid ABC transporter membrane protein 1, PAAT family from Pseudomonas syringae pv. syringae B728a

 Score =  216 bits (549), Expect = 4e-61
 Identities = 114/243 (46%), Positives = 160/243 (65%), Gaps = 20/243 (8%)

Query: 4   LQGYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPD 63
           L+G+   +L+G  +T+++AVLSL L++LLG++GA AK++     R  A +YTT+IRG+PD
Sbjct: 16  LKGFGPLLLEGTWMTVKLAVLSLALSILLGLIGASAKLSSSALLRVPAQIYTTLIRGVPD 75

Query: 64  LVLMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIG 123
           LVLM+LIF+                +  WLT      EW     +Y++I+PF AGV+T+G
Sbjct: 76  LVLMLLIFYS---------------LQTWLTMLTDAMEW-----EYIEINPFGAGVITLG 115

Query: 124 FIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVL 183
           FI+GAY  ETFRGAIL+V +G++EAA AYG+     FR ++ PQM+R+A+PG GNNW VL
Sbjct: 116 FIYGAYFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVL 175

Query: 184 LKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLERKFSI 243
           LK TALVSIIGL D+V+ S  A  ST   F F +  A+I+L  TS S   L+  ER ++ 
Sbjct: 176 LKATALVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYLLITSASNFALRWAERYYAA 235

Query: 244 HTR 246
            +R
Sbjct: 236 GSR 238