Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., ABC transporter permease subunit from Synechocystis sp000284455 PCC 6803

 Score =  114 bits (284), Expect = 5e-30
 Identities = 64/230 (27%), Positives = 116/230 (50%), Gaps = 27/230 (11%)

Query: 10  SILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLVLMML 69
           ++ KG++LT+ +   S+   ++ G   A+A ++  +  + I  +Y    RG P LV + +
Sbjct: 306 NLFKGSILTVLLTAFSVFFGLIGGTGVAIALISDIKPLQLIFRIYVEFFRGTPMLVQLFI 365

Query: 70  IFFGGQILLNN-GLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIGFIFGA 128
           I+FG   L    GL                           + I  F A ++ +     A
Sbjct: 366 IYFGLPALFKEIGLG--------------------------ITIDRFPAAIIALSLNVAA 399

Query: 129 YMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLLKTTA 188
           Y+AE  RG I ++D+G+ EA ++ GMS   + + ++ PQ  R  +P  GN ++ L+K T+
Sbjct: 400 YLAEIIRGGIQSIDQGQWEACESLGMSPWQTMKEVIFPQAFRRILPPLGNEFITLIKDTS 459

Query: 189 LVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLE 238
           L ++IG +++ R   L   +T   F  Y+AVA+++L  T++S+ + K LE
Sbjct: 460 LTAVIGFQELFREGQLIVATTYRAFEVYIAVALVYLLLTTISSFVFKWLE 509