Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., L-lysine ABC transporter, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  151 bits (381), Expect = 1e-41
 Identities = 86/234 (36%), Positives = 133/234 (56%), Gaps = 19/234 (8%)

Query: 6   GYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLV 65
           G+   I  G L+T  +AV +L + +++G   ALAK +  +  R    +YTTI RG+P+L+
Sbjct: 44  GWGDEIAYGFLVTASLAVATLPVGLVIGFFVALAKQSEEKSLRLAGNIYTTIFRGLPELL 103

Query: 66  LMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIGFI 125
            + ++++G QIL           + Q+L         V Y    V+I+ FVAG++ +G +
Sbjct: 104 TLFIVYYGLQIL-----------VQQFLAT-------VGY-EGAVEINAFVAGMIALGVV 144

Query: 126 FGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLLK 185
           F AY +E    A  A+  G+ EA  A G+    + R I+LPQ+IR A+PG GN W+ LLK
Sbjct: 145 FSAYCSEVLLSAFKAIPHGQYEAGDALGLHRGKTMRLIILPQLIRIALPGLGNLWMALLK 204

Query: 186 TTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLER 239
            TALVS+IGL D++R + +AA  TK  F F+    ++FL    +S+ +   LER
Sbjct: 205 DTALVSVIGLPDILRQTGIAARVTKHAFEFFGIACVLFLVLAMISSVVFSALER 258