Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score =  110 bits (274), Expect = 3e-29
 Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 21/234 (8%)

Query: 11  ILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLVLMMLI 70
           + +G  +T+++  L++ + + + +  AL ++ P    RA    +    RG P L+ + L+
Sbjct: 14  LFEGLPVTLKLVTLAVAIGVFIAIPTALLRVHPSPLVRAFPYAFIFFFRGTPLLIQIALV 73

Query: 71  FFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIGFIFGAYM 130
           ++G      + L W  E    W   R+P                F   ++      GAY 
Sbjct: 74  YYG-----LSTLPWIRENEVLWPILREP----------------FWCALIAFALNTGAYS 112

Query: 131 AETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLLKTTALV 190
           AE  RGAI A+ +GE+EAA+AYGM   +  RRI+LP+  +  +P +GN  +++LK +AL 
Sbjct: 113 AEILRGAIQAIPRGEVEAARAYGMRGLLIVRRIILPRAFQIGLPAYGNEIILILKGSALA 172

Query: 191 SIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLERKFSIH 244
           S I L D+  ++ L       P   ++   +I+L    + T  L+L+ER+ S H
Sbjct: 173 SSITLLDITGVARLLYARYYTPVEAFVTAGVIYLILVYLLTRGLRLIERRLSRH 226