Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 218 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score =  118 bits (296), Expect = 8e-32
 Identities = 68/236 (28%), Positives = 120/236 (50%), Gaps = 31/236 (13%)

Query: 11  ILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLVLMMLI 70
           +LKGA  TI ++++ +LL  ++G L  + +++  R   AI  LY +  RG+P L+ ++LI
Sbjct: 13  LLKGAGSTIAISLVGILLGQVIGALVCVGRLSGNRLIDAIGALYVSFFRGVPLLIQLLLI 72

Query: 71  FFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIGFIFGAYM 130
           ++   ++                                +D+   +A +  +G   GAY+
Sbjct: 73  YYMLPLI-------------------------------GIDVPALMAAIGALGLASGAYV 101

Query: 131 AETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLLKTTALV 190
           +E +RG++ A+ +G+ EAA A G S    +RRILLPQ  R ++P   N  ++LLK ++L+
Sbjct: 102 SEIYRGSLNAIPRGQGEAALALGFSGGSIWRRILLPQAFRLSVPALVNELILLLKASSLI 161

Query: 191 SIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLERKFSIHTR 246
           S+IG+ ++ R+S   + ST      YMA  +I+         L  L+ER   +  R
Sbjct: 162 SVIGVAELTRVSQTVSASTYRALEIYMAAGVIYFLINGCLAILGALVERHLRLQGR 217