Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., putative histidine transport system permease protein HisQ from Phaeobacter inhibens DSM 17395

 Score =  142 bits (359), Expect = 5e-39
 Identities = 78/236 (33%), Positives = 133/236 (56%), Gaps = 24/236 (10%)

Query: 6   GYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLV 65
           G+  ++L+G   ++++A+ +  + +++G+ GA  K+      R +  +YTT+IR +P+LV
Sbjct: 23  GWGGNLLRGLANSLQIALGAFGMGLIIGLFGAYGKLYGGPILRDLLAIYTTVIRAVPELV 82

Query: 66  LMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDY--VDISPFVAGVLTIG 123
           L++++++ G  L+N                       VA    Y  V+IS  VAG+  +G
Sbjct: 83  LILILYYVGTDLINK----------------------VAGSLGYGRVEISGIVAGIWVLG 120

Query: 124 FIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVL 183
            + GAY  E  RGAI AV  G++EAA++YGM   M+ RR+ +P M+  A PG  N WL+ 
Sbjct: 121 IVQGAYATEVLRGAIKAVPPGQIEAARSYGMPPFMTMRRVTIPAMMSFATPGLANLWLIA 180

Query: 184 LKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLER 239
            K TAL++I+G  ++   +  AA ST+  FTF++A   ++L  T  S+ +   +ER
Sbjct: 181 TKDTALLAIVGFAELTLETRQAASSTRAYFTFFLAAGALYLMITLCSSVIFGWIER 236