Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., histidine/lysine/arginine/ornithine ABC transporter permease HisQ from Klebsiella michiganensis M5al

 Score =  220 bits (561), Expect = 2e-62
 Identities = 119/245 (48%), Positives = 163/245 (66%), Gaps = 30/245 (12%)

Query: 4   LQGYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPD 63
           L G+   I +GAL+T+E+A+ S++LA+L+G+ GA AK++  R    I   YTT+IRG+PD
Sbjct: 2   LYGFSQVIFQGALVTLELALSSVVLAVLIGLAGAGAKLSNNRPLALIFEGYTTLIRGVPD 61

Query: 64  LVLMMLIFFGGQILLNN-----GLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAG 118
           LVLM+LIF+G QI LN+     GL+ F                         DI P VAG
Sbjct: 62  LVLMLLIFYGLQIALNSVTDALGLAQF-------------------------DIDPMVAG 96

Query: 119 VLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGN 178
           ++T+GFI+GAY  ETFRGA LAV  G +EAA A+G S   +FRRIL P M+R+A+PG GN
Sbjct: 97  IITLGFIYGAYFTETFRGAFLAVPTGHIEAATAFGFSGGQTFRRILFPAMMRYALPGIGN 156

Query: 179 NWLVLLKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLE 238
           NW V+LK TALVS++GLED+V+ + LA  ST  PF F +   +I+L FT+VS G+L +LE
Sbjct: 157 NWQVILKATALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGLIYLVFTTVSNGVLLMLE 216

Query: 239 RKFSI 243
           R++S+
Sbjct: 217 RRYSV 221