Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., L-histidine ABC transporter, permease component 1 (from data) from Burkholderia phytofirmans PsJN

 Score =  171 bits (434), Expect = 9e-48
 Identities = 89/234 (38%), Positives = 139/234 (59%), Gaps = 19/234 (8%)

Query: 5   QGYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDL 64
           +G+   +L  AL+T+ + + +L +  + G L A AK++ +R  R I  +YTT+ RG+P+L
Sbjct: 12  EGWGGVLLLAALMTVALTLAALAVGAVFGALVAAAKLSRFRTLRVIGDIYTTVFRGVPEL 71

Query: 65  VLMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIGF 124
           +++ L +FGG  L+ +        + Q   A             +V + PFV G L +G 
Sbjct: 72  LVIYLFYFGGSTLVTS--------VGQLFGAEG-----------FVGVPPFVVGALAVGM 112

Query: 125 IFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLL 184
           I GAY AE +R A+LAV +GELEAA++ GM      RRIL+PQ++R A+PG GN W + L
Sbjct: 113 ISGAYQAEVYRSAVLAVSRGELEAARSIGMPTLTMARRILIPQVLRFALPGIGNVWQLSL 172

Query: 185 KTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLE 238
           K +AL+S+ GL +++R S +AAGST   FTF++    ++L  TS+S  +    E
Sbjct: 173 KDSALISVTGLAELLRTSQVAAGSTHQYFTFFVVGGALYLIMTSISNRVFNRAE 226