Pairwise Alignments

Query, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., histidine/lysine/arginine/ornithine ABC transporter permease HisQ from Burkholderia phytofirmans PsJN

 Score =  211 bits (538), Expect = 8e-60
 Identities = 115/246 (46%), Positives = 154/246 (62%), Gaps = 26/246 (10%)

Query: 4   LQGYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPD 63
           LQGY   +L G   T+++AVLSL  A +LG+LGA AK++  R++  + T+YTT++RG+PD
Sbjct: 3   LQGYGPLLLNGTWQTVKLAVLSLAFAFVLGLLGAAAKLSKNRFSYGVGTVYTTLVRGVPD 62

Query: 64  LVLMMLIFFGGQILLNNG---LSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVL 120
           LVLM+L+F+  QI LNN    L W                       D +DI PFVAGV 
Sbjct: 63  LVLMLLLFYSIQIWLNNLTDLLGW-----------------------DQIDIDPFVAGVA 99

Query: 121 TIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNW 180
            +GFI+GAY  ETFRGA LAV +G+LEA  AYGM+    F R++ PQM+R A+PG GNNW
Sbjct: 100 VLGFIYGAYFTETFRGAFLAVPRGQLEAGAAYGMTGWQVFTRVMFPQMMRFALPGIGNNW 159

Query: 181 LVLLKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLERK 240
            V++K TALVSIIGL D+V+ S  A   T   F F +    I+L  T+VS  +L  LE++
Sbjct: 160 QVMVKATALVSIIGLADVVKASQDAGKGTLRFFFFTLFAGAIYLVITTVSNFVLMYLEKR 219

Query: 241 FSIHTR 246
           +S   R
Sbjct: 220 YSTGVR 225