Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., Amino acid ABC transporter, permease protein from Pseudomonas fluorescens FW300-N2E2

 Score =  193 bits (490), Expect = 3e-54
 Identities = 102/219 (46%), Positives = 150/219 (68%), Gaps = 4/219 (1%)

Query: 1   MDFSLIIDSLPIYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFL 60
           M++ +II  LP    G   T+ LV+++++ GLL AIPL IAR+S+        + YI+F 
Sbjct: 1   MNWDVIIKWLPKLAQGATLTLELVAIAVLAGLLLAIPLGIARSSRLWQVRALPYAYIFFF 60

Query: 61  RGTPLLVQLYLIYYGMDQWFPVKDT-LWEHA---WFCALVAFILNTSAYTAEIIRGAING 116
           RGTPLLVQL+L+YYG+ Q+  V+ + +W +    ++CA     L+T+AY AEI+RGAI  
Sbjct: 61  RGTPLLVQLFLVYYGLAQFEAVRSSAMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQA 120

Query: 117 LPKGEVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTG 176
           +P+GE+EAA+A GMSR +    I+LP A R  LPAYSNEVI ML  SA+A  VT+++LTG
Sbjct: 121 IPRGEIEAARALGMSRPKALFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180

Query: 177 AARLVNSRYYAPFEAFLSAGLFYMALTFIILWCFKQAEQ 215
            AR + +R Y P E F +AG+FY+ ++++++  FKQ E+
Sbjct: 181 MARTIIARTYLPVEIFFAAGMFYLLMSYLLVQGFKQLER 219