Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., ABC transporter for L-Lysine, permease component 2 (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  185 bits (469), Expect = 7e-52
 Identities = 100/217 (46%), Positives = 139/217 (64%), Gaps = 5/217 (2%)

Query: 12  IYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLVQLYL 71
           + ++GL  T+WL+S SL+IG L +IPL+IAR S + +   P   Y Y  RGTPL +QL +
Sbjct: 18  VNVTGLAMTLWLLSASLLIGFLVSIPLSIARVSPKFYVRWPVQFYTYLFRGTPLYIQLLI 77

Query: 72  IYYGMDQWF-----PVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKGEVEAAK 126
            Y G+         P+ D+ +  A  C ++AF LNT AYT EI  GAI  +  GEVEAAK
Sbjct: 78  CYTGIYSIAAVRAQPLLDSFFRDAMNCTILAFALNTCAYTTEIFAGAIRSMNHGEVEAAK 137

Query: 127 AYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSRYY 186
           AYG++ ++ Y  +I+PSALRRSLP YSNEVI MLH + VA   T+ D+   AR  NS  +
Sbjct: 138 AYGLTGWRLYTYVIMPSALRRSLPYYSNEVILMLHSTTVAFTATVPDVLKVARDANSATF 197

Query: 187 APFEAFLSAGLFYMALTFIILWCFKQAEQRFLAYLKP 223
             F++F  A L Y+ +TF ++  F+ AE+R+LA+L P
Sbjct: 198 LTFQSFGIAALIYLTVTFALVGLFRLAERRWLAFLGP 234