Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., putative histidine transport system permease protein HisM from Phaeobacter inhibens DSM 17395

 Score =  154 bits (390), Expect = 1e-42
 Identities = 79/214 (36%), Positives = 124/214 (57%), Gaps = 8/214 (3%)

Query: 11  PIYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLVQLY 70
           P+ L GLWTT+W++ ++ ++G   A+PL +A+     + S PA  +   +RGTPLL+Q++
Sbjct: 40  PLALEGLWTTIWILVVTSILGFALAVPLGLAQAVGPWYLSTPARIFCTVIRGTPLLLQIW 99

Query: 71  LIYYGMDQWFPV-----KDTLWEH---AWFCALVAFILNTSAYTAEIIRGAINGLPKGEV 122
           L+YYG+   FP         LW +   AW  A++A  L+ + Y  E++RGA +G+ KG++
Sbjct: 100 LLYYGLGSLFPQFPWIRSSELWPYLRQAWPYAVLALTLSYAGYEGEVMRGAFSGVAKGQL 159

Query: 123 EAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVN 182
           EAAKAYGM R   ++RI LP A+R  LP    E I  L  + +   +T++D+   +  V 
Sbjct: 160 EAAKAYGMPRLTMFRRIWLPQAVRNVLPTLGGETILQLKATPLVATITVLDIYAVSSRVR 219

Query: 183 SRYYAPFEAFLSAGLFYMALTFIILWCFKQAEQR 216
           S  +  +E  L   L YMA+  +I   FK+ E R
Sbjct: 220 SDTFIVYEPLLLLALVYMAIAGVITLAFKRFEDR 253