Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., histidine/lysine/arginine/ornithine ABC transporter permease HisM from Klebsiella michiganensis M5al

 Score =  187 bits (474), Expect = 2e-52
 Identities = 101/216 (46%), Positives = 140/216 (64%), Gaps = 5/216 (2%)

Query: 15  SGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLVQLYLIYY 74
           +G+  T+WL+  S+V+G + A+ LAI R S  K+   P W + Y  RGTPL VQL + Y 
Sbjct: 21  TGVAITLWLLISSVVMGGILAVFLAIGRVSSNKFIQFPIWLFTYIFRGTPLYVQLLVFYS 80

Query: 75  GMDQWFPVKDTLWEHAWF-----CALVAFILNTSAYTAEIIRGAINGLPKGEVEAAKAYG 129
           GM     VK T   +A+F     C ++A  LNT AYT EI  GAI  +P GE+EAA+AYG
Sbjct: 81  GMYTLEIVKGTELLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPAGEIEAARAYG 140

Query: 130 MSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSRYYAPF 189
            S  + Y+ IILPSALR +LPAYSNEVI MLH +A+A   T+ DL   AR +NS  Y PF
Sbjct: 141 FSSVKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQPF 200

Query: 190 EAFLSAGLFYMALTFIILWCFKQAEQRFLAYLKPRS 225
            AF  A + Y+ ++++++  F++AE+R+L ++KP S
Sbjct: 201 TAFGIAAVLYLIISYVLISLFRRAEKRWLQHIKPSS 236