Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., polar amino acid ABC transporter inner membrane subunit from Klebsiella michiganensis M5al

 Score =  176 bits (445), Expect = 5e-49
 Identities = 93/240 (38%), Positives = 147/240 (61%), Gaps = 19/240 (7%)

Query: 1   MDFSLIIDSLPIYL--------SGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLP 52
           M+    ID++P +L        SGL  T  L  LS+V G+  AI +A+ +    +  +LP
Sbjct: 1   MNLQTFIDAIPSFLWSDGNGAASGLAVTAELFLLSIVPGMALAIAMAVGQVYGPRGLALP 60

Query: 53  AWGYIYFLRGTPLLVQLYLIYYGMDQWFPVKDTLWEH----------AWFCALVAFILNT 102
              + YF R TPL +QL LIYYG+ Q F +  T W +          A FCA +A +LNT
Sbjct: 61  IRAFTYFFRSTPLYLQLMLIYYGLSQ-FDIVQTGWMNDQPFWLLFRDATFCATLALVLNT 119

Query: 103 SAYTAEIIRGAINGLPKGEVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHG 162
           +AY AE++ G +   P+ E  A +AYGM ++Q  +R++LP+ LRR +PA +NE++F+LH 
Sbjct: 120 AAYVAELLAGMMVTFPRQEWIAGEAYGMGKWQIIRRLVLPATLRRGIPALNNEMVFLLHA 179

Query: 163 SAVAGIVTIMDLTGAARLVNSRYYAPFEAFLSAGLFYMALTFIILWCFKQAEQRFLAYLK 222
           +++A  VT++D+TG AR   +  Y+PF  FL A   Y+  TF++++ F +AE+R+LA+++
Sbjct: 180 TSLASTVTLLDITGVARAFYAMTYSPFIPFLMAAALYLLCTFLLIFTFARAERRWLAFIR 239