Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., amino acid ABC tranporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  124 bits (310), Expect = 2e-33
 Identities = 68/210 (32%), Positives = 119/210 (56%), Gaps = 5/210 (2%)

Query: 8   DSLPIYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLV 67
           + LP    GL T++ L+  S  +GLL  I +   R     W       Y    RG PL+V
Sbjct: 10  EMLPALNRGLITSMMLIVPSATLGLLFGIIVGTGRVFGPAWVRKAGDIYTATFRGVPLVV 69

Query: 68  QLYLIYYGMDQWFPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKGEVEAAKA 127
           QL +IY+G+         ++   +  A++ F+L ++AY +E +RGA+  + +G+++AA+A
Sbjct: 70  QLMIIYFGLPNI-----GIYLEPFPAAVLGFVLCSAAYNSEYVRGALLSIRQGQLKAAQA 124

Query: 128 YGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSRYYA 187
            G S+ +T   I++P A+RR+LP   NE+I+++  S++A ++T ++LTG  ++V +R + 
Sbjct: 125 LGFSKLKTVLFIVVPQAVRRALPGCGNEIIYLIKYSSLAYVITCIELTGEGKVVAARSFR 184

Query: 188 PFEAFLSAGLFYMALTFIILWCFKQAEQRF 217
             E FL  G +Y+ L  +  W   + EQ F
Sbjct: 185 FTEVFLFVGAYYLFLVTLASWILHRVEQHF 214