Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., cystine transport system permease protein from Caulobacter crescentus NA1000

 Score =  127 bits (318), Expect = 2e-34
 Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 5/212 (2%)

Query: 5   LIIDSLPIYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTP 64
           L+  S P+ L G   T+ L  + + IG++    LA+ R S+      PA  Y+   RGTP
Sbjct: 7   LLRQSAPLLLKGAGYTIVLSVIGMSIGVVLGFLLALMRLSRSALLRWPAGVYVSAFRGTP 66

Query: 65  LLVQLYLIYYGMDQWFPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKGEVEA 124
           LLVQL+LIYYG+ Q+      L       A + F LN +AY+ EI+R AI  + KG+ EA
Sbjct: 67  LLVQLFLIYYGLPQFGLEMPPL-----VAAGIGFSLNVAAYSCEILRSAIAAVDKGQWEA 121

Query: 125 AKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSR 184
           A   GMSR QT +R+ILP A R ++   SN  I ++  +++A  + + +L   A+L+ +R
Sbjct: 122 ASVLGMSRGQTLRRVILPQAARTAVAPLSNSFISLVKDTSLAATIQVPELFRQAQLITAR 181

Query: 185 YYAPFEAFLSAGLFYMALTFIILWCFKQAEQR 216
            Y  F  +L+A   Y  L+ I+     + E+R
Sbjct: 182 TYEIFTLYLAAAAIYWILSTILAAAQTRLERR 213