Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., L-histidine ABC transporter, permease component 2 (from data) from Burkholderia phytofirmans PsJN

 Score =  149 bits (375), Expect = 6e-41
 Identities = 80/225 (35%), Positives = 134/225 (59%), Gaps = 4/225 (1%)

Query: 2   DFSLIIDSLPIYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLR 61
           DF  + D++   L+ + TT+ L   SL++G L ++ +   R S     +  A  YI   R
Sbjct: 4   DFDFLFDTIKQLLAAVPTTLGLFFCSLILGGLLSLVIVTMRVSPHWLPNRFARAYILVFR 63

Query: 62  GTPLLVQLYLIYYGMDQWFPVKDT-LW---EHAWFCALVAFILNTSAYTAEIIRGAINGL 117
           G+PLL+Q++L+YYGM Q+  ++++ LW      + CA+++  L T+ YTAEIIRG +  +
Sbjct: 64  GSPLLIQMFLVYYGMGQFGVIRESFLWPVLREPYMCAVLSLALCTAGYTAEIIRGGLMAV 123

Query: 118 PKGEVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGA 177
           P G++EA  + G+S F   +R+I P ALR+ LPAYS E + ++  +A+A +VT+ ++TG 
Sbjct: 124 PVGQIEAGYSIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGV 183

Query: 178 ARLVNSRYYAPFEAFLSAGLFYMALTFIILWCFKQAEQRFLAYLK 222
           A+ +  + Y   E F+ A L Y+ L F+I+      E R   +L+
Sbjct: 184 AQQIIQQTYRTTEVFICAALIYLFLNFVIVRLLGMLETRLSRHLR 228