Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 237 a.a., ABC transporter for L-Arginine, permease component 1 (from data) from Burkholderia phytofirmans PsJN

 Score =  200 bits (509), Expect = 2e-56
 Identities = 108/217 (49%), Positives = 140/217 (64%), Gaps = 5/217 (2%)

Query: 14  LSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLVQLYLIY 73
           +SGL  T+WL+  S+ IG   AIPLA+AR SK++W S P   Y Y  RGTPL VQL LIY
Sbjct: 20  MSGLAVTLWLLVASVGIGFCAAIPLAVARVSKKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79

Query: 74  YGMDQWFPVK-----DTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKGEVEAAKAY 128
            GM     V+     D  +   + CA++AF LNT AYT EI  GAI     GEVEAA+AY
Sbjct: 80  TGMYSLEFVRSHQLLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTSHGEVEAARAY 139

Query: 129 GMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSRYYAP 188
           GMS F  Y+RI++PSALRR+LP YSNEVI MLH + VA   T+ D+   AR  NS  Y  
Sbjct: 140 GMSWFTMYRRIVIPSALRRALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYQS 199

Query: 189 FEAFLSAGLFYMALTFIILWCFKQAEQRFLAYLKPRS 225
           F+AF  A L Y+ ++F+++  F++AE+ +L YL  R+
Sbjct: 200 FDAFGLAALIYLVVSFVLVALFRRAERHWLGYLAVRT 236