Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 237 a.a., histidine/lysine/arginine/ornithine ABC transporter permease HisM from Burkholderia phytofirmans PsJN

 Score =  209 bits (533), Expect = 3e-59
 Identities = 109/216 (50%), Positives = 145/216 (67%), Gaps = 5/216 (2%)

Query: 14  LSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLVQLYLIY 73
           L+G+  T+WL+ +S+ +G   +IPLA+AR SK+KW S   W Y Y  RGTPL VQL L Y
Sbjct: 20  LTGVVITLWLLVVSIGLGFCLSIPLAVARVSKKKWLSRLVWLYTYVFRGTPLYVQLLLCY 79

Query: 74  YGMDQWFPVKDTLWEHAWF-----CALVAFILNTSAYTAEIIRGAINGLPKGEVEAAKAY 128
            G+     +++    +A+F     C L+AF LNT AYT EI  GAI   P GE+EAA+AY
Sbjct: 80  TGLYSLEIIRNHELTNAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATPYGEIEAARAY 139

Query: 129 GMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSRYYAP 188
           GMS F  Y+R+ILPSALRR+LP YSNEVI MLH + VA   T+ D+   AR VNS  Y  
Sbjct: 140 GMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVPDILKIARDVNSATYQS 199

Query: 189 FEAFLSAGLFYMALTFIILWCFKQAEQRFLAYLKPR 224
           F AF  A L Y+ ++F ++W F++AE+R+LAYL+P+
Sbjct: 200 FNAFGIAALLYLCISFALVWLFRRAERRWLAYLRPQ 235