Pairwise Alignments

Query, 268 a.a., exodeoxyribonuclease III from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., exodeoxyribonuclease III protein from Sinorhizobium meliloti 1021

 Score =  105 bits (262), Expect = 1e-27
 Identities = 80/278 (28%), Positives = 138/278 (49%), Gaps = 23/278 (8%)

Query: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQ-VYFHGQ 59
           + + ++NIN +R R+  ++  +   QPD++ LQEIK  ++ FP   +  +GY+ +  HGQ
Sbjct: 3   LSIATWNINSVRLRMPLVEHFLKTWQPDILCLQEIKCRNDQFPSAPLRKLGYEYIEMHGQ 62

Query: 60  KAHYGVAILCKQTPVEVIKGFPTDNEEH----QKRMIMATFADQNGQKTTILNGYFPQGD 115
           K ++GVA + +    E+     +D  ++      R +   FA   G+   + N Y P G 
Sbjct: 63  KGYHGVATISRLPLHEL-----SDRRDYCGVGDARHLSVVFA-AGGKTIRLHNFYVPAGG 116

Query: 116 NVEHET---KFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRW 172
           +    T   KF +K  F  D M  L          +++GD+NI+PL+ D+     + K+ 
Sbjct: 117 DEPDRTVNPKFGHKLDFV-DEMKLLHAEAEAGVSSILVGDLNIAPLEHDVW----SHKQL 171

Query: 173 LQTGKCSFQPEEREWLQTLLDWGL-VDTFRQLHPDVSDQFSWFDYRSRGF-EDNRGLRID 230
           L+    S  P E E L +++  G  VD  R+  P     ++W+ YR++ +   +RG R+D
Sbjct: 172 LKI--VSHTPVETEGLVSVMTGGAWVDLMRRHAPPPEKLYTWWSYRAKDWTAADRGRRLD 229

Query: 231 VILATPTLAETCQEAGIDYELRAIDKPSDHAPIWTTFK 268
            I ++  LA       I  E R  ++PSDH P+   F+
Sbjct: 230 HIWSSADLASQLVRVEILKEARGWERPSDHVPVIAHFE 267