Pairwise Alignments

Query, 268 a.a., exodeoxyribonuclease III from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., Endonuclease/exonuclease/phosphatase (NCBI) from Rhodospirillum rubrum S1H

 Score = 41.6 bits (96), Expect = 2e-08
 Identities = 58/268 (21%), Positives = 113/268 (42%), Gaps = 47/268 (17%)

Query: 1   MKVISFNI-NGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVE----AMGYQVY 55
           ++V+ +NI +G   R+  +   I +H+PDV+ L E + +D +  R         + Y+ +
Sbjct: 12  IRVVCWNILHGGGRRVDAILTRIVRHRPDVLILTEFR-NDASGQRLRAGLRDIGLWYEHF 70

Query: 56  FHGQKAHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGD 115
               K   GV I  +   V+ ++  P D    +  +++           +++  Y P G 
Sbjct: 71  VPTHKTSNGVLIAARDY-VDAVQ--PLDTTVRKPHLLLEGLV----AGLSVIGVYMPMG- 122

Query: 116 NVEHETKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQT 175
               E K PY    +  ++   R  R  +   +V+GD N               K ++  
Sbjct: 123 ----EAKTPY----WEAVVAAAR--RREASPTLVIGDFNTG-------------KHFIDE 159

Query: 176 GKCSFQPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILAT 235
              S       ++  + + G VD +R  +P+   +F+WF ++  GF      R+D   A+
Sbjct: 160 KGTSLV--SAPFMNRMEEAGFVDLWRARNPE-GREFTWFSHKGNGF------RLDHAFAS 210

Query: 236 PTLAETCQEAGIDYELRAIDKPSDHAPI 263
           P+LA    +    +  R +D+ SDH+ +
Sbjct: 211 PSLAARVTDVFYSHAER-LDRISDHSAL 237