Pairwise Alignments

Query, 268 a.a., exodeoxyribonuclease III from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., exodeoxyribonuclease III (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 28/270 (10%)

Query: 1   MKVISFNINGLRARLHQLQ----ALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYF 56
           +K+ S+N+NG+RA   + +    A  D H   ++GLQE K   E  P    +  G++ ++
Sbjct: 3   LKLYSWNVNGIRALSGKPEWNWFAGCDGH---IVGLQETKAEPEQVPAAHRDPEGWKAWW 59

Query: 57  HG---QKAHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQ 113
                +K + GVA+  +  P+ V    P    + + R I   F   +       N YFP 
Sbjct: 60  LASRVKKGYSGVAVFSRVEPLAVHLDMPDPAWQGEGRCIHLEFPAFH-----YFNIYFPN 114

Query: 114 GDNVEHETKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWL 173
           G   + E +  YK  FY   + +  + R +   +VV GD N +   +D+   + N     
Sbjct: 115 GG--QGEERLNYKLGFYDAFLNHAEDLRRHKP-IVVCGDFNTAHRPIDLARPKDNEDI-- 169

Query: 174 QTGKCSFQPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVIL 233
                 F P ER W+      G VDTFR +  D    +SW+ Y++R  E N G RID   
Sbjct: 170 ----SGFLPIERAWMDRFTAAGYVDTFRLVQGDTPHAYSWWSYKTRARERNVGWRIDYFF 225

Query: 234 ATPTLAETCQEAGIDYELRAIDKPSDHAPI 263
            +  L    ++A ID  +      SDH P+
Sbjct: 226 VSEELRGAVRDAWIDMHVMG----SDHCPV 251