Pairwise Alignments

Query, 268 a.a., exodeoxyribonuclease III from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., exodeoxyribonuclease III from Methanococcus maripaludis JJ

 Score =  100 bits (250), Expect = 2e-26
 Identities = 73/271 (26%), Positives = 131/271 (48%), Gaps = 25/271 (9%)

Query: 1   MKVISFNINGLRARLHQ-LQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFH-- 57
           MK++S+N+NG+RA L       +++  PD++ +QE KV      + ++   GY  Y++  
Sbjct: 1   MKMLSWNVNGIRACLKNGFMDFLERESPDIMCIQETKVQSG---QVQLGLDGYFQYWNYA 57

Query: 58  GQKAHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGDNV 117
            +K + G AI  K  P  VI G       ++ R+I   F +       ++N Y P     
Sbjct: 58  ERKGYSGTAIFTKIKPNNVILGMENSEHNNEGRVITLEFDEYY-----LVNVYTPNSQR- 111

Query: 118 EHETKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGK 177
              T+  Y++++  D + Y++   +    +V  GD+N++  ++D+   + N K       
Sbjct: 112 -GLTRLEYRQKWDEDFLNYIKTLETKKP-VVFCGDLNVAHKEIDLKNPKTNVKN------ 163

Query: 178 CSFQPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPT 237
             F PEER     +++ G +DTFR+ + + +D +SW+ YR      N G RID    + +
Sbjct: 164 AGFTPEERSGFDNIVNSGFLDTFREFNKE-TDNYSWWSYRFNARAKNIGWRIDYFCISKS 222

Query: 238 LAETCQEAGIDYELRAIDKPSDHAPIWTTFK 268
           L +  + A I  E+      SDH P+   F+
Sbjct: 223 LRDNLKNAFIMPEIMG----SDHCPVGIIFE 249