Pairwise Alignments

Query, 268 a.a., exodeoxyribonuclease III from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., exodeoxyribonuclease (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  129 bits (324), Expect = 6e-35
 Identities = 83/268 (30%), Positives = 134/268 (50%), Gaps = 25/268 (9%)

Query: 1   MKVISFNINGLRARLHQ-LQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHG- 58
           MK+I++N+NGLRA   + L   + +  PD++ LQE K+  + +P +  EA+GY+ Y +  
Sbjct: 1   MKIITYNVNGLRAAASKGLPEWLVQENPDILCLQETKLQPDQYPAEVFEALGYKAYLYSA 60

Query: 59  -QKAHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGDNV 117
            +K + GVAIL KQ P  V  G   +  +++ R I A F D      ++++ Y P G + 
Sbjct: 61  QKKGYSGVAILTKQEPDHVEYGMGIEAYDNEGRFIRADFGD-----LSVVSVYHPSGTSG 115

Query: 118 EHETKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINI--SPLDLDIGIGEANRKRWLQT 175
           +    F  K  +  D   Y+ E R     L++ GD NI   P+D+   +  A        
Sbjct: 116 DERQAF--KMVWLEDFQKYVTELRKTRPNLILCGDYNICHEPIDIHDPVRNATNS----- 168

Query: 176 GKCSFQPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILAT 235
               F PEEREW+   L  G +D+FR L+P+   +++W+ YR      N+G RID  + +
Sbjct: 169 ---GFLPEEREWMTRFLSAGFIDSFRLLYPE-KQEYTWWSYRFNSRAKNKGWRIDYCMTS 224

Query: 236 PTLAETCQEAGIDYELRAIDKPSDHAPI 263
             +    + A I  +       SDH P+
Sbjct: 225 EPVRPMLKSASILNDA----VHSDHCPM 248