Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  387 bits (995), Expect = e-112
 Identities = 235/713 (32%), Positives = 388/713 (54%), Gaps = 9/713 (1%)

Query: 1   MRQISVQWKITLLAGLCLVFTSLALIGFSIYNARASQQTAKLQSSESVIDKSQQLLQTGA 60
           M+  S+Q+ +  LAG  ++    AL+ +S++    +Q+  + ++        +Q L   A
Sbjct: 1   MKFRSIQFSVAALAGAIVLSVVGALVLYSLFAGARTQEMVQQRTKAQFEQLIEQRLTALA 60

Query: 61  LLNATEISEYLSEAIYRAEMLAANALFLKNNSEENFGESEVLRTSLDEMVRKSVLGFDTI 120
              A+ I   L   +  A  LA +   +  N  +   + +V R  +  ++R++V+    I
Sbjct: 61  RTQASLIQRELEAPLLLARGLATSNALMGMNGTDGNPQLKVPREQMISLLRETVVRNPKI 120

Query: 121 EGAYLVFRPNMLDSEDSNYVNADYVGSNDIGQFAAYWTKAANGQNVISRV--LTQAQLTE 178
            GAY+ + PN +D +D+NYVN   VG    G+F  +W +  +G   + ++  +T  +L  
Sbjct: 121 LGAYIAWEPNAIDHDDANYVNRQVVGMETNGRFLPWWFRNQDGSLGLEKLADVTDQKLLS 180

Query: 179 ESNK--ERFVCPIEQASPCITSPRMVEFETGRYLATSLSVPILIDGVAIGFYGIDLTLAP 236
              +  E ++C  +    C+  P      +   +  S   PI+IDG   G  G DL++  
Sbjct: 181 TGIRASEYYLCSQDSKKACVIDPAPYRVGSTMTMLASFIEPIMIDGQFQGIVGADLSVNF 240

Query: 237 LIGITQKSDNNLFDGQGKVSIVSENNALVASDAAFLTLGETFQSENLSRSTVSSL--LQA 294
           +  +   +D  L+DG G+++++S NN LVA       LGE   S+ L  S + +L  L  
Sbjct: 241 IQDMLVAADGKLYDGAGEMALLSSNNRLVAFTKDPSKLGEK-ASDLLDASALDNLAKLGD 299

Query: 295 GQVNTQWSEDGQWLVVFAPIKVANQN--WGIIFEMPRQSVMQDAEQLDILLTEQLERGIR 352
           G+V     E    + V+ P  +   N  W ++ ++P  +VM D + L   L  Q +  I 
Sbjct: 300 GEVRYDIDEAHGHIEVYMPFGIGETNARWTLMLQLPLNAVMADLQALQKDLDHQRQADIF 359

Query: 353 SELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQL 412
              +VG ++  +GLLV+ L+   + RP++ +   L DI+ GEGDLT+RL  + ADE+G +
Sbjct: 360 GMAIVGLVIAGIGLLVIWLVGHGIARPLKQMVAMLDDIAQGEGDLTRRLVSDRADELGAI 419

Query: 413 AQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEM 472
           A+GFN F+ KLQ +I +VV +   V  ++E        T +    Q  E+D VATA  EM
Sbjct: 420 ARGFNTFLSKLQGMITQVVTSVQSVSDSSEHTADIAIRTNQGVHKQMSEIDQVATAVHEM 479

Query: 473 TQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNN 532
           T T+  V  NA +A  AAS A +AA  G +++R +   +  L   +  AV VV+ LA+++
Sbjct: 480 TATAQDVARNATQAAQAASHADQAASQGMQIVRDTSTSIGALAVEIGKAVGVVQTLAKDS 539

Query: 533 TGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIR 592
             I  IL+ I GI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ +  EI+
Sbjct: 540 ENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATEEIQ 599

Query: 593 SVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQ 652
           ++I +++ GT+DVV+ ++ S      + +  A A   L  +  A+  IN+M+ QI  AA+
Sbjct: 600 TMIQQLQQGTRDVVRVMEDSQTRTDESVQHAAKAAQALETITQAVSVINDMNTQIASAAE 659

Query: 653 DQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705
           +Q  V+  + ++V+NI  ++ ++ S  + S      + +L+ +Q+ L+ QF+V
Sbjct: 660 EQSAVADDINRNVINIGQVANEVASGADESSAASAGLTKLAEQQRRLINQFRV 712