Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  244 bits (622), Expect = 1e-68
 Identities = 163/498 (32%), Positives = 262/498 (52%), Gaps = 19/498 (3%)

Query: 210 LATSLSVPILIDGVAIGFYGIDLTLAPLIGITQKSDNNLFDGQGKVSIVSENNALVASDA 269
           LA  + + +   G  +G  G+ L++  L   ++   N  F  +GKV +V  +  +     
Sbjct: 164 LALFIDLKVSQGGKVVGVAGLGLSMKEL---SELIHNFSFGERGKVYLVRSDGLIQVHPE 220

Query: 270 AFLTLGETFQSENLSRSTVSSLL-QAGQVNTQWSEDGQ-WLVVFAPIKVANQNWGIIFEM 327
           A L+  +   +E +  S   +++   G  ++ +  DG+ +L +  P++  +  W ++ E+
Sbjct: 221 AGLS-NKRQLAEQIGDSAAQAVMGHQGPTSSGFVRDGEDYLALSLPLR--DLGWTLVAEV 277

Query: 328 PRQSVMQDAEQLDILLTEQLERGIRSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERL 387
           P+  +  +A Q  + LT  +  G+           +V LL+V L+A  LVRPIR V   L
Sbjct: 278 PQSQIYAEARQA-MWLTSAIGLGV----------ALVCLLLVVLLARGLVRPIRQVTAAL 326

Query: 388 QDISSGEGDLTQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKST 447
             I SG GDLT RL  + ADE+G LA+GFN F++  + +I  V+  + ++ +   QV   
Sbjct: 327 VAIGSGGGDLTHRLDSSRADELGDLARGFNRFLENQRNMIGEVLATSERLRTAVGQVARV 386

Query: 448 VESTRRSSEAQFKEVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHS 507
           VE+T   S  Q +  D VATA  EM  T   + +NA  A  A+  A+  A    EV+  S
Sbjct: 387 VENTAERSGRQQEMTDMVATAVHEMGLTVQEIAQNAGNAAVASQTARDEALQAREVVGGS 446

Query: 508 QMQMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQG 567
              +  + D + +A   V ELA     I ++L+VI GISEQTNLLALNAAIEAARAG+ G
Sbjct: 447 IRHIESMSDEIGIAASAVGELATQVASIDQVLAVIRGISEQTNLLALNAAIEAARAGDMG 506

Query: 568 RGFAVVADEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAV 627
           RGFAVVADEVR+LA RTQ+S  EI+ +I  ++ G ++ V ++           E      
Sbjct: 507 RGFAVVADEVRTLARRTQSSTDEIQQMIGSLKQGAENAVSSMHSGQAATGTGVESSQRTG 566

Query: 628 TQLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGE 687
             L  +   +  I++M+HQ+  A ++Q  V+ ++ ++V  I DL+     E  A  +  +
Sbjct: 567 ASLTAITGQVERISDMNHQVATATEEQSAVTEEINRNVQGISDLARATAGEVRACREDCQ 626

Query: 688 QIARLSFEQQTLVGQFKV 705
            + RL+ +    +G FK+
Sbjct: 627 TLQRLADDLARQMGGFKL 644