Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N1B4

 Score =  232 bits (592), Expect = 4e-65
 Identities = 158/513 (30%), Positives = 271/513 (52%), Gaps = 26/513 (5%)

Query: 196 ITSPRMVEFETGRYLATSLSVPILIDGVAIGFYGIDLTLAPLIGITQKSDNNLFDGQGKV 255
           +T P  ++  +G+ L  S+   +L DG +IG  G DL+L  +       D   FDG G  
Sbjct: 140 LTEP-YIDLASGQ-LVISIVNSVLKDGQSIGVVGGDLSLQVIADSLNALD---FDGMGYA 194

Query: 256 SIVSENNALVASDAAFLTLGETFQSENLSRSTVSSLLQAGQVNTQWSEDGQW-LVVFAPI 314
            ++S +  ++      L +      ++LS +   +  + G   ++   DG+  +V F PI
Sbjct: 195 FLISADGKILVHPDKSLAM------KSLSEAYPKNTPRIGSELSEIDVDGKTRIVTFTPI 248

Query: 315 K-VANQNWGIIFEMPRQSVMQDAEQLDILLTEQLERGIRSELMVGTLMVVVGLLVVTLMA 373
           K +++ NW I        +  D ++   +L+E      R+  ++ T++ V  ++ +  M 
Sbjct: 249 KGLSSVNWYI-------GLSVDKDKAFSMLSE-----FRTSAVIATIIAVAIIIALLGML 296

Query: 374 MRL-VRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRVVD 432
           +RL ++P+  +   ++DI+ GEGDLT+RL + + DE G L   FN F++++   IR V  
Sbjct: 297 IRLLIQPLHVMTRAMEDIADGEGDLTKRLTIQNQDEFGILGTAFNRFVERVHTSIREVSS 356

Query: 433 NTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMTQTSAHVVENAQRAVNAASD 492
            TGQV     +V +   S+  +S+ Q     SVA A  ++   +  +  NA +A + ASD
Sbjct: 357 ATGQVNEVALRVVAASNSSMFNSDQQASRTSSVAAAINQLGAAAQEIARNAAQASSQASD 416

Query: 493 AQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTNLL 552
           A+  A+ G +V+  S   MNQL   ++ +   +E L      I +IL VI  IS+QTNLL
Sbjct: 417 ARSLAEDGQQVVDRSIAAMNQLSTMLSASSTNIESLNSKTVNIGQILEVITSISQQTNLL 476

Query: 553 ALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQGS 612
           ALNAAIEAARAGE GRGFAVVADEVR+LA RTQ S  +++++I ++++G ++ V  +  S
Sbjct: 477 ALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEELQVGARESVSTMSDS 536

Query: 613 NETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLS 672
              +Q + E    A  +LN V   I  I+ M+  +  A ++Q  V   +   +  I  L+
Sbjct: 537 QRHSQDSVEIANLAGERLNSVTLRIGEIDGMNQSVATATEEQTAVVESINVDITEINTLN 596

Query: 673 AQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705
            + +   +++ +    + + +   + LVG F++
Sbjct: 597 QEGVENLQSTLRACSDLEQQASRLKQLVGSFRI 629