Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  214 bits (545), Expect = 1e-59
 Identities = 156/504 (30%), Positives = 259/504 (51%), Gaps = 34/504 (6%)

Query: 210 LATSLSVPILIDGVAIGFYGIDLTLAPLIGITQKSDNNLFDGQGKVSIVS-ENNALVASD 268
           L  S++ P   +G  IG  G DL L  L+ I    D   F+G G   +VS +   LV  D
Sbjct: 152 LVISIATPAQQNGRNIGVVGGDLGLKVLVEIINALD---FNGMGHAFLVSGDGKILVHPD 208

Query: 269 AAFL--TLGETFQSENLSRSTVSSLLQAGQVNTQWSE---DGQWLVV-FAPIK-VANQNW 321
            + +  +LGE F     S            ++  +SE   DGQ  ++ F+ ++ + + +W
Sbjct: 209 GSKVMKSLGELFPGHTPS------------LDANYSEAELDGQTRILSFSRVQGLPSVSW 256

Query: 322 GIIFEMPRQSVMQDAEQLDILLTEQLERGIRSELMVGTLMVVVGLLVVTLMAMRLVRPIR 381
            +   + +      A+    L + +    + +   VG +++++G+L+  LM     RP+ 
Sbjct: 257 YVGISLDK------AKAYAALASFRTSAVVAALTAVGVILLLLGMLMRVLM-----RPLT 305

Query: 382 AVAERLQDISSGEGDLTQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTT 441
            +   + +I+ GEGDLT+RL V S DE G+LA  FN F++++   IR V   T QV    
Sbjct: 306 DMGRAMANIAEGEGDLTRRLAVQSKDEFGELASAFNRFVERIHTSIREVSSATQQVNEVA 365

Query: 442 EQVKSTVESTRRSSEAQFKEVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGD 501
            +V +   S+  +S+ Q    +SVA A  E+   +  +  NA  A   AS A+  A+ G 
Sbjct: 366 ARVLAASNSSMANSDEQASRTNSVAAAINELGAAAQEIARNAADASQQASGARHQAEDGR 425

Query: 502 EVIRHSQMQMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAA 561
           +V+  +   M +L  +++ +   +E L      I +IL VI+GISEQTNLLALNAAIEAA
Sbjct: 426 QVVEQNIAAMRELSAKISASCAQIEALNAKTVDIGQILEVIKGISEQTNLLALNAAIEAA 485

Query: 562 RAGEQGRGFAVVADEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAE 621
           RAGE GRGFAVVADEVR+LA RTQ+S  EI+ +I ++++G    V+ +  S   ++++  
Sbjct: 486 RAGEAGRGFAVVADEVRNLAHRTQSSAQEIQQMIEQLQVGAGASVQTMTESQRQSESSVS 545

Query: 622 QVADAVTQLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEA 681
               A  +L  V   I  I+ M+  +  A ++Q  V   +   +  I  L+ Q +   ++
Sbjct: 546 IADRAGERLGEVTQRIGEIDGMNQSVATATEEQTAVIESLNMDITEINTLNQQGVENLQS 605

Query: 682 SEKVGEQIARLSFEQQTLVGQFKV 705
           + +    + + +   + LV  F++
Sbjct: 606 TLRACGDLDQQARRLKQLVDSFRI 629