Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  372 bits (955), Expect = e-107
 Identities = 226/708 (31%), Positives = 382/708 (53%), Gaps = 9/708 (1%)

Query: 5   SVQWKITLLAGLCLVFTSLALIGFSIYNARASQQTAKLQSSESVIDKSQQLLQTGALLNA 64
           S+Q     LAG C +    AL+ +++ +   SQ   + ++   +    +Q +   A    
Sbjct: 4   SIQTAFAALAGACTLAIIAALLLYAMVSGMRSQALVEERTRTLIDGMVEQRVTALAQSQV 63

Query: 65  TEISEYLSEAIYRAEMLAANALFLKNNSEENFGESEVLRTSLDEMVRKSVLGFDTIEGAY 124
           + I   L   +  A  LA        + +E    + + R  L  + R++++   ++   Y
Sbjct: 64  SRIQAQLQAPLQIATGLARVHTLTGLSDDEGMPMANLTREELINLARQTLIENPSLTSTY 123

Query: 125 LVFRPNMLDSEDSNYVNADYVGSNDIGQFAAYWTKAANGQNVISRV--LTQAQLTEESNK 182
           + + PN +D+ D  Y   D  G  + G+FA++  + A+G+ +  R+  +    L E   +
Sbjct: 124 IAWEPNGVDANDVMY-RGDVPGMLE-GRFASWIYRDASGKLLTERLTDIEDTTLLETGVR 181

Query: 183 --ERFVCPIEQASPCITSPRMVEFETGRYLATSLSVPILIDGVAIGFYGIDLTLAPLIGI 240
             E ++CP EQ  PC+  P   E      L +S + PI+IDG   G  G D+ +  +  +
Sbjct: 182 AGEYYLCPREQLKPCVGDPAPYEMNGQTQLLSSFNAPIIIDGKFHGIVGADIGVDFMQQL 241

Query: 241 TQKSDNNLFDGQGKVSIVSENNALVASDAAFLTLGE-TFQSENLSRSTVSSLLQAGQVNT 299
              +++ L+ G G+++++S N  L A       LG+   Q  +     +   L AGQ + 
Sbjct: 242 LSSANSQLYGGAGQIALISNNGRLAAYSRDRNLLGKPAAQLLDADEQALVKQLPAGQTHY 301

Query: 300 QWSEDGQWLVVFAPIKV--ANQNWGIIFEMPRQSVMQDAEQLDILLTEQLERGIRSELMV 357
           +       + +F P      +  W ++ E+P   VM++ +QL + L E+    + + L++
Sbjct: 302 RIDHARGRVALFLPFSFPGTDARWVLMLELPTAEVMKELDQLMVALGEESRSNLAAMLVI 361

Query: 358 GTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQLAQGFN 417
           G L+   GLL + L++ R+ RP+R +   L +IS GEGDLTQRL ++S +E+GQ+A GFN
Sbjct: 362 GMLIAFAGLLAIWLISRRITRPLRDMVVMLDNISQGEGDLTQRLNIDSRNELGQIAAGFN 421

Query: 418 LFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMTQTSA 477
            F+ +LQ +I  VV +  +V   +E        T +  + Q  E++ VATA  EMT T+ 
Sbjct: 422 AFLARLQGMISEVVSSVQKVSDASEHTADIAIRTDKGVQTQLAEIELVATAVHEMTATAQ 481

Query: 478 HVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNTGIIE 537
            V  NA +A  AA++A RAA  G  +++ +   + +L   +  AV VV+ LAR++  I  
Sbjct: 482 DVARNATQAAEAANNADRAANQGRHIVQDTGATIAELASEIGRAVDVVQTLARDSENIDA 541

Query: 538 ILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRSVINK 597
           IL  I  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ + GEI+ +I +
Sbjct: 542 ILVTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATGEIQQMIQQ 601

Query: 598 VELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQDQQTV 657
           ++ GT+DVV+ ++ S    + + EQ   A   L  +  A+  IN+M++QI  AA++Q  V
Sbjct: 602 LQGGTRDVVQVMEQSQNRTRRSVEQADAAAEALQAITQAVSLINDMNNQIASAAEEQSAV 661

Query: 658 SAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705
           +  + ++V NI  ++ Q+ +  + + +    + RL+ +Q+ L+ QF+V
Sbjct: 662 AEDINRNVTNIGQVAQQVAAGADEASQASAGLTRLAEQQRRLINQFRV 709