Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  226 bits (577), Expect = 2e-63
 Identities = 152/461 (32%), Positives = 235/461 (50%), Gaps = 20/461 (4%)

Query: 259 SENNALVA--SDAAFLTLGETFQSENLSRSTVSSLL---QAGQVNTQWSEDGQWLVVFAP 313
           ++ N  VA  SDAA  + GE   +     S +   L   Q   ++   +E  Q+   F  
Sbjct: 194 TQENVFVANSSDAAAKSWGELHGNVTAIGSNLKVWLNDDQQASMDKALAELEQYRAAFDE 253

Query: 314 IKVANQNWGIIFEMPRQSVMQD------AEQLDILLTEQLERGIRSELM----VGTLMVV 363
            +   QN G   E+ R    Q       A++     +  +++  RS  +    +G L + 
Sbjct: 254 FR---QNRGERLELERSMAQQSEVVIAAADEALANASNAMQQQQRSSYLLLGVIGALAIF 310

Query: 364 VGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQLAQGFNLFMDKL 423
           VGLL  T+++  +V P+R+  ++ Q +++G  DLT        DE+GQL    +     L
Sbjct: 311 VGLLAATVISRMIVGPLRSTVQQAQRVANG--DLTHSEASARRDEVGQLQNAMHGMTQSL 368

Query: 424 QPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMTQTSAHVVENA 483
           + +I R+     Q+ +  +Q+ +    T    + Q  E + VATA  EM  T   V  NA
Sbjct: 369 RNLIGRIGGGVSQIAAAADQLSAVTAQTSAGVQTQRVETEQVATAMHEMAATVQEVARNA 428

Query: 484 QRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNTGIIEILSVIE 543
           ++A  AA  A + A+ GD V++ +  Q+  L   ++ +   +E L   +  I  +L VI 
Sbjct: 429 EQASIAARQADQQARQGDRVVQDAVGQIGNLASEVDQSAHAIEALHAESGRIGSVLEVIR 488

Query: 544 GISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRSVINKVELGTQ 603
            ++EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RT  S  EI  +I  ++   Q
Sbjct: 489 AVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALARRTHDSTEEIEGLIANLQRVAQ 548

Query: 604 DVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQ 663
             V+ +Q S    Q T +   +A   L R+  ++  I +M+ QI  AA+ Q  V+  +++
Sbjct: 549 QAVEQMQSSRSLTQRTVDLANEAGVALGRITESVSTIEQMNQQIAAAAEQQSAVAENISE 608

Query: 664 SVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFK 704
           SV  +RD+  Q  S TE +     ++ARL  E Q LV QF+
Sbjct: 609 SVTRVRDIGDQSASATEQTAGASAELARLGVELQGLVRQFR 649