Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 724 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  249 bits (637), Expect = 3e-70
 Identities = 197/737 (26%), Positives = 343/737 (46%), Gaps = 58/737 (7%)

Query: 5   SVQWKITLLAGLCLVFTSLALIGFSIYNARASQQTAKLQSSESVIDKSQQLLQTGALLNA 64
           S+Q +I +  GLCL+ T+  LIG+S+Y A  +QQ    + S+   + + Q LQ      A
Sbjct: 6   SIQQRIAITGGLCLLATAGILIGYSVYLASTTQQLVSGRVSQQAQEDALQTLQHLGGKYA 65

Query: 65  TEISEYLSEAIYRAEMLAANALFLKNNSEENFGESEVLRTSLDEMVRKSVLGFDTIEGAY 124
            EI    +EA+  A  +A      K+ S  N G  ++ R  ++ ++   +       G Y
Sbjct: 66  GEIRSEFTEALEAARGMATTFAVGKSGST-NSGGLQIGRDEVNSILLNVLKSQPDFNGTY 124

Query: 125 LVFRPNMLDSEDSNYVNADYVGSNDIGQFAAYWTKAANGQNVISRVLTQAQLTEESNKER 184
             + P+ +D +D  + +     +   G+F  YWT+ A+G+  +  ++    + +  N   
Sbjct: 125 SCWEPDAIDGQDFLFTDGQNGNNGQTGRFTPYWTRGADGKIAVQPLVEYDTMDKHPNGVL 184

Query: 185 ----FVCPIEQASPCITSPRMVEFETGRYLATSLSVPILIDGVAIGFYGIDLTLAPLIGI 240
               ++ P E     +  P     +  +    +LSVPI++DG   G  G D  L  +  I
Sbjct: 185 KGGWYIGPRETLKESVLGPLPYIVQGKQVWLATLSVPIIVDGRFTGVAGTDYNLDFVQQI 244

Query: 241 TQKSDNNLFDGQGKVSIVSENNALVASDAAFLTLGETFQSENLSR-STVSSLLQAGQVNT 299
           +Q+    LFDGQG+V+I+S+   +VA       +G+ FQ        T  + +Q G+   
Sbjct: 245 SQEVSAKLFDGQGEVAIISDQGLIVAESRFPNLIGQHFQKVLPDGWQTALTSVQKGEELA 304

Query: 300 QWSEDGQWLVVFAPIKVANQN--WGIIFEMPRQSVMQDAEQLDILLTEQLERGIRSELMV 357
           +  ++G  +VVFAPI++      W ++ ++ ++ V+  A +L   +  Q  R +  ++  
Sbjct: 305 RLDDNGM-VVVFAPIELGRTGKPWSMMLKIDKEIVLAKATELKAEMDAQSARSMLQQIGA 363

Query: 358 GTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQLAQGFN 417
           G L+ ++ ++ + + +  L  PIR  A+    I   +GD +QR+   SADE+GQL+   +
Sbjct: 364 GVLISLLAVIALWISSRALALPIRKAAQLAGAIQ--KGDFSQRMAHQSADEVGQLSASLD 421

Query: 418 LFMDKLQP----------------------------IIRRVVDNTGQVVSTTEQVKSTVE 449
              D LQ                              +RR+VDN   +VS  +Q    + 
Sbjct: 422 RMADSLQEQVHVAERISQGDLAVEVRLASEQDQLGLALRRMVDNLNGLVSQVQQSSELIN 481

Query: 450 STRRSSEAQFKEVDSVAT-AAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQ 508
                     +++ + AT +A  +T+ SA V + A + +   S+    A        HS 
Sbjct: 482 DKAGRVTTLSQDLSNGATESASAVTEISATVNQMAGQ-IRQTSEYASEANALSRNSEHSA 540

Query: 509 MQMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGR 568
              N+L+  +  A+   +E+ ++   I  I+  IE I+ QTNLLALNAAIEAARAGE GR
Sbjct: 541 RSGNELMVSLKAAM---QEINQSGLDITNIIRAIEEIATQTNLLALNAAIEAARAGEHGR 597

Query: 569 GFAVVADEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVT 628
           GFAVVADEVR LA+R+  +               Q   + IQ SN       E   D   
Sbjct: 598 GFAVVADEVRQLAARSAEA--------------AQRSTRLIQESNARTIKGMEITDDTAR 643

Query: 629 QLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQ 688
            L  +      ++++  +I  A+  Q +   QV+Q++  I ++     + +E S +  ++
Sbjct: 644 ALEAIVQGAAQVSQLVDEIASASSQQASGIEQVSQAIGQIDEVVHHNSTNSEQSTQAAQE 703

Query: 689 IARLSFEQQTLVGQFKV 705
           + + + +    VG+FKV
Sbjct: 704 LTQQAQQMIVQVGRFKV 720