Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  239 bits (610), Expect = 3e-67
 Identities = 138/350 (39%), Positives = 197/350 (56%)

Query: 356 MVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQLAQG 415
           M+  ++  + L+ +   A R+V+PIRA+ + L DI+ GEGDLT RL V   DEI +L   
Sbjct: 209 MMSLVLAFITLIAIWSAAHRMVKPIRAMVDSLNDIAKGEGDLTARLSVRGEDEIAELGIA 268

Query: 416 FNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMTQT 475
           FN F+DKLQ IIR V D TG+V      +            +   E D V TA  EM+ T
Sbjct: 269 FNQFVDKLQGIIRDVADTTGRVKQAAVDIDRQTSEMANQLNSHNNETDQVVTAITEMSST 328

Query: 476 SAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNTGI 535
           +A V +N  +   A   A          +  S  +++ L+ ++N A   ++ L+  +  I
Sbjct: 329 AAEVAQNTTQVAEATQAATGDVAKAQACVDTSLAEISNLMSQVNDAAANIQSLSEQSQKI 388

Query: 536 IEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRSVI 595
             +LSVI GI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LASRTQAS  EI  ++
Sbjct: 389 NSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQASTLEINEML 448

Query: 596 NKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQDQQ 655
             +       VK +  S  + Q + E        L  V SA+ AIN+MS QI  AA +Q 
Sbjct: 449 TDLHRLVSSAVKTMDESQHSCQRSVEASTAISESLGSVTSAVTAINDMSTQIAAAATEQS 508

Query: 656 TVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705
           +V+ ++ ++V  I+++   +L  ++ +  V   ++    +   LVGQFKV
Sbjct: 509 SVTEEINRNVYAIQEIVNALLVSSQEARTVSRTVSTEGAQLSNLVGQFKV 558