Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  265 bits (677), Expect = 6e-75
 Identities = 193/615 (31%), Positives = 316/615 (51%), Gaps = 52/615 (8%)

Query: 120 IEGAYLVFRPNMLDSEDSNYVNADYVGSND-IGQFAAYWTKAANGQNVISRVLTQAQLTE 178
           I   Y  F PN  D  DS +     + S + +G    Y+ +  +G        TQ+Q+ +
Sbjct: 113 ISSMYAQFEPNGFDGRDSEFTAPGLMHSVEGVGTLEVYFYRNDDGSQ------TQSQVDD 166

Query: 179 ESNK-------------ERFVCPIEQASPCITSPRMVEFETGR-YLATSLSVPILIDGVA 224
            + K             E ++C  +   PC+  P + E   G   L TSL+VPI+  G  
Sbjct: 167 ANEKYADTLNEFGLREAEWYLCAKDTQKPCLMEPYLYEITPGNNMLMTSLTVPIVRGGRF 226

Query: 225 IGFYGIDLTLAPLIGITQKSDNNLFDGQGKVSIVSENNALVAS---DAAFLTLGETFQSE 281
            G  G+DL L     + ++   +L+ GQ KV+++S    +VA+   D     LGE     
Sbjct: 227 RGVVGVDLNLPVFQKMIEELSASLYQGQAKVTLLSTKGLIVAASHYDKKARPLGEA---- 282

Query: 282 NLSRSTVSSLLQAGQVNTQWSEDGQWLVVFA-PIKVANQNWGIIFEMPRQSVMQDAEQLD 340
            + +S  + +L  G+ +     D   +V +   I ++   W +  E+PRQ  +  AEQ++
Sbjct: 283 -IDKSLANQILGLGKGDGYLLNDSSMIVAYPINIPLSGSQWLLAIEVPRQIALASAEQVE 341

Query: 341 ILLTEQLERGIRSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQR 400
             +        R  L++G  +  V ++++ L    +V PI+ + +R+  ++S EGDLTQ 
Sbjct: 342 GSMQAMAASLGRFVLLLGIGIAAVAVILIALFIRSVVAPIQQIQQRVSQLASAEGDLTQS 401

Query: 401 LQVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFK 460
           L+V+   E+  L  GFN F+ KL  +I  +     +  + ++      E T++S   Q+ 
Sbjct: 402 LKVDEHAELIALGNGFNAFIGKLHGLISELKKVATESRNESQATARIAEETKQSVNRQYS 461

Query: 461 EVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNL 520
           E++SV TA  EM+ T+  V + +++   A+  A  A+Q   +V + S  Q   LV  M+ 
Sbjct: 462 EIESVVTAVNEMSHTAHEVAKASEQT--ASESAAMASQV--KVSQDSLTQAVSLVSTMSK 517

Query: 521 ----AVPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADE 576
               A   V ++A ++T I +IL VI  I+ QTNLLALNAAIEAARAGEQGRGFAVVADE
Sbjct: 518 ESLQAKIAVGKVAESSTNISKILEVISAIAAQTNLLALNAAIEAARAGEQGRGFAVVADE 577

Query: 577 VRSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSA 636
           VRSLAS+TQAS  +I  +I+ +E      VK   G  +     AEQ   AV Q  + F A
Sbjct: 578 VRSLASKTQASTDDISRLIDALE----QEVKGASGIIDKGVGLAEQ---AVAQTEQAFEA 630

Query: 637 ----IHAINEMSHQIVQ---AAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQI 689
               +  INE+S+Q+ Q   AA++Q  V+ +V++++  I D +A+++     + +  E +
Sbjct: 631 LSVMVAGINEISNQVTQIATAAEEQSAVTEEVSRNITGISDSAAELMDLAGKARESSESL 690

Query: 690 ARLSFEQQTLVGQFK 704
           A+L   Q++ + + +
Sbjct: 691 AKLVGRQESQLAKLR 705