Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25-INTG

 Score =  208 bits (530), Expect = 6e-58
 Identities = 150/488 (30%), Positives = 252/488 (51%), Gaps = 28/488 (5%)

Query: 222 GVAIGFYGIDLTLAPLIGITQKSDNNLFDGQGKVSIVSEN-NALV-ASDAAFLTLGETFQ 279
           G  +G  G+D++L  L   T+   N      G + +V  N N LV  SDA        F+
Sbjct: 182 GNILGVVGLDVSLKQL---TELVRNIKLGDSGYLMLVEGNGNVLVDPSDAK-----HNFK 233

Query: 280 SENLSRSTVSSLLQAGQVNTQWSEDGQWLVVFAPIKVANQN--WGIIFEMPRQSVMQDAE 337
                    + L + G   +Q   DG   V +    V++++  W  I  + R  VM  A 
Sbjct: 234 PLADLGPNYAELAKRGDGVSQIDIDG---VAYMANMVSSKDLGWRFIGLIKRDEVMAGAT 290

Query: 338 QLDILLTEQLERGIRSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDL 397
           +L  L+             +  ++ +V  +V    A  +VRPIR VA+ LQ+I+ GEGDL
Sbjct: 291 RLTWLIAA-----------IAAVLALVFAIVGASFASVIVRPIRGVADGLQEIAEGEGDL 339

Query: 398 TQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEA 457
           T++L+V   DE   LA  FN F+  +  +++R+ + +  + +          +  +++  
Sbjct: 340 TRQLKVQGKDETASLAGWFNQFLSMIAQLVQRIGNASSDLQTAAADTSEVAHNMNQAAGR 399

Query: 458 QFKEVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDR 517
           Q + V+ V+TA  EM  T+  V  +   A  +A +  R    G + I  +   + +L + 
Sbjct: 400 QREAVELVSTAFNEMVATANEVARSCSAAATSADEGYRDVHDGQQHIGEATGSVLKLSED 459

Query: 518 MNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEV 577
           +  +   ++ L +++  I  IL  I  I+EQTNLLALNAAIEAARAG+QGRGFAVVADEV
Sbjct: 460 LQKSTQTMQLLEQDSKNINTILDTIRSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEV 519

Query: 578 RSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAI 637
           R+LA RT  S GEI S++  +   TQ+V + +QGS + +  + E++  A    +++  ++
Sbjct: 520 RALARRTADSTGEIDSLLGNLARRTQEVTQQMQGSLQVSHTSVERIQQARDSFDKIRGSV 579

Query: 638 HAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGE-QIARLSFEQ 696
            +I + + QI  AA++Q  V+ ++ + +  I    AQ++ E   S + G  ++  +S + 
Sbjct: 580 DSIRDQNTQIATAAEEQHQVAEEINRHIAQIH-ADAQLVEEFAHSAQTGSGRLTDISGQL 638

Query: 697 QTLVGQFK 704
           + LVG+FK
Sbjct: 639 KGLVGRFK 646