Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25-INTG

 Score =  437 bits (1124), Expect = e-127
 Identities = 262/714 (36%), Positives = 394/714 (55%), Gaps = 10/714 (1%)

Query: 1   MRQISVQWKITLLAGLCLVFTSLALIGFSIYNARASQQTAKLQSSESVIDKSQQLLQTGA 60
           +RQ+S+QWKITLLAGLCL+     L+G S+Y    S Q  K  S + + + +Q  ++   
Sbjct: 3   LRQLSIQWKITLLAGLCLLGIVTLLVGLSLYRMAQSSQQVKASSMQMLDEAAQARIEAQG 62

Query: 61  LLNATEISEYLSEAIYRAEMLAANALFLKNNSEENFGESEVLRTSLDEMVRKSVLGFDTI 120
            + A  I     +A       +   LFL+  +E+ F ++   R  L   V+ ++     +
Sbjct: 63  EVQALGIRRQFMDAYQYGHGFSRQVLFLREQAEKRFLDAFDTREDLTRQVKAALQANPDL 122

Query: 121 EGAYLVFRPNMLDSEDSNYVNADYVGSNDIGQFAAYWTKAANGQNVISRV----LTQAQL 176
            G  LVF  N LD +D  +     +GSND G+FA YW++   G+     +    ++  QL
Sbjct: 123 LGLSLVFEANALDGKDELFAGQAELGSNDKGRFALYWSQPTPGKLTSMALPESDMSNTQL 182

Query: 177 TEESNKER--FVCPIEQASPCITSPRMVEFETGRYLATSLSVPILIDGVAIGFYGIDLTL 234
           +    K    F CP     PC+  P   + +    L TS+  P++++G  I    +D+ L
Sbjct: 183 SPSGEKANAWFTCPRTTLKPCVIEPYFYKIDGQNVLMTSIVFPLMVNGNVIASLSVDINL 242

Query: 235 APLIGITQKSDNNLFDGQGKVSIVSENNALVASDAAFLTLGETFQSENLSRST--VSSLL 292
             L  ++Q++   L+DGQ +VSI+S    L         L +     + +     +S+L 
Sbjct: 243 NSLQAVSQQASQKLYDGQTQVSILSPTGLLAGYSPDASKLSQRLDQVDTTNGAQLISALA 302

Query: 293 QAGQVNTQWSEDG-QWLVVFAPIKVANQNWGIIFEMPRQSVMQDAEQLDILLTEQLERGI 351
            + Q+ +  S+   + L  FAPI    + WG++ ++P   ++  AE L   L     +G 
Sbjct: 303 GSTQIRSLRSDHQLKVLAPFAPIP-EGKPWGVLLDVPENVLVAPAEALKAQLDADNAKGT 361

Query: 352 RSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQ 411
             EL +G +  VVGL++V LMA  + RPI  VA  L+DI+SGEGDLT+RL  +  DE+GQ
Sbjct: 362 LLELSLGLIAAVVGLILVWLMARSVTRPILGVAHMLEDIASGEGDLTRRLAYDKQDELGQ 421

Query: 412 LAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEE 471
           LA  FN F+DKLQPII  V  +      T +Q  +    T    E Q+++VD VATA+ E
Sbjct: 422 LAGWFNRFLDKLQPIIAEVKRSVQDARGTADQSAAIATQTSAGMEQQYRQVDQVATASHE 481

Query: 472 MTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARN 531
           M+ T+  V  +A +A  AA +A +A + G  VI  +   +  L   M+ A+  VE LA N
Sbjct: 482 MSATAQDVARSAAQAAQAAREADQATRDGLTVIDRTTANIGHLAADMSTAMAQVEGLAAN 541

Query: 532 NTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEI 591
           +  I  +L VI GI+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ SV E 
Sbjct: 542 SEKIDSVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVEET 601

Query: 592 RSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAA 651
           R VI +++ GT DVV A+  S   AQ + EQV +AVT L ++  A+  I++M+ QI  AA
Sbjct: 602 RLVIEQLQSGTVDVVGAMGNSYRQAQGSVEQVGEAVTALRQIGDAVTVISDMNLQIASAA 661

Query: 652 QDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705
           ++Q  V+ ++  +V  IRD++  +  +   S +V + +  L+ +QQ L+ QF+V
Sbjct: 662 EEQSAVAEEINSNVATIRDVTESLSEQANESARVSQALNSLANQQQGLMDQFRV 715