Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 714 a.a., Methyl-accepting chemotaxis protein TlpQ from Pseudomonas aeruginosa PA14

 Score =  457 bits (1175), Expect = e-132
 Identities = 269/714 (37%), Positives = 416/714 (58%), Gaps = 13/714 (1%)

Query: 1   MRQISVQWKITLLAGLCLVFTSLALIGFSIYNARASQQTAKLQSSESVIDKSQQLLQTGA 60
           +R++S+QWKITLLAGLCL+     L+G S+Y  + S    K  S++ + + ++  L+   
Sbjct: 3   LRRLSIQWKITLLAGLCLLGVVALLVGLSVYRMQHSSVLVKSASTQMLDESARLRLEARG 62

Query: 61  LLNATEISEYLSEAIYRAEMLAANALFLKNNSEENFGESEVLRTSLDEMVRKSVLGFDTI 120
            L A  I  Y  +A    +  +   LFL++ +++ F ++  LR  L   VR ++     +
Sbjct: 63  ELQALRIQRYFMDAFQYGKGFSRQILFLRDQAQKRFLDAYDLREDLTRQVRTALAANPEV 122

Query: 121 EGAYLVFRPNMLDSEDSNYVNADYVGSNDIGQFAAYWTKAANGQNVISRVLTQAQLTEES 180
            G Y+VF PN LD +D  +V+   +GSND G+F+ YW +A  GQ + S  + +++L + S
Sbjct: 123 LGLYVVFEPNALDGKDELFVDQPALGSNDKGRFSLYWAQATPGQ-LESESMVESELADTS 181

Query: 181 NKER-------FVCPIEQASPCITSPRMVEFETGRYLATSLSVPILIDGVAIGFYGIDLT 233
           +          + CP E A PC+  P   +    + L TS++ P+ +DG  IG  G+D+ 
Sbjct: 182 SGPSGAAYNAWYTCPKESAQPCVLDPYFDKVGERQLLMTSIAFPLELDGKVIGVMGLDIN 241

Query: 234 LAPLIGITQKSDNNLFDGQGKVSIVSENNALVASDAAFLTLGETF-QSENLSRSTVSSLL 292
           L+ L  ++++ +  L+DG G+V I+S       +      LG+   +++      +  LL
Sbjct: 242 LSNLQALSEQGNRELYDGVGQVGILSPAGLFAGNSRDAGLLGKNLAKADPQHADELLQLL 301

Query: 293 QAGQVNTQWSEDGQWLVVFAPIKV--ANQNWGIIFEMPRQSVMQDAEQLDILLTEQLERG 350
            AG+  +Q   +   L V  P++     + WG++ E+P+ +++  A  L+  L +    G
Sbjct: 302 AAGK--SQLFNENDDLKVLQPLQPIPGAKPWGVLLEVPKSALLGPALALERQLDDMRREG 359

Query: 351 IRSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIG 410
              EL +G    V+GLLV+ L A  + RPI  VA  L+DI+SGEGDLTQRL     DE+G
Sbjct: 360 TWVELGLGLGAAVLGLLVLWLSARGVTRPILGVAHMLRDIASGEGDLTQRLPHTGRDELG 419

Query: 411 QLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAE 470
           +LA  FN F+DKLQPIIR V  +     ST +Q  +    T    + QF+E+D VATA+ 
Sbjct: 420 ELAGWFNRFLDKLQPIIRDVKVSVRDARSTADQSAAISSQTSAGMQQQFREIDQVATASH 479

Query: 471 EMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELAR 530
           EMT T+  V  +A +A +AA  A +A + G  +I  +   ++ L   +  A+  VE+LA 
Sbjct: 480 EMTATAQDVARSAAQAADAARGADQATRDGLALIDRTTQSIDSLAANLTSAMGQVEQLAS 539

Query: 531 NNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGE 590
           ++  I  +L VI  I+EQTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA RTQ SV +
Sbjct: 540 SSEEIGSVLEVIRAIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRNLARRTQDSVEQ 599

Query: 591 IRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQA 650
           IR VI  ++ GT+DVV A+ GS+  AQ + EQV +AV  L R+  A+  IN+M+ QI  A
Sbjct: 600 IRGVIEGLQQGTRDVVDAMHGSHRQAQGSVEQVDEAVAALQRIGEAVTVINDMNLQIASA 659

Query: 651 AQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFK 704
           A++Q +V+ ++ ++V  IRD++  + S+ E S +V + + RL+  QQ L+ QFK
Sbjct: 660 AEEQSSVAEEINRNVAAIRDVTESLSSQAEESAQVSQSLNRLANHQQGLMEQFK 713