Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., Methyl-accepting chemotaxis protein PctC from Pseudomonas aeruginosa PA14

 Score =  226 bits (575), Expect = 3e-63
 Identities = 196/708 (27%), Positives = 324/708 (45%), Gaps = 80/708 (11%)

Query: 1   MRQISVQWKITLLAGLCLVFTSLALIGFSIYNARASQQTAKLQSSESVIDKSQQLLQTGA 60
           +R +S   KI L A L +VF     I ++ Y  R + +T          D    L + G 
Sbjct: 2   LRSLSFAKKILLAAALVVVFAFTCFILYNDYRQREAVRT----------DTENYLGEIGT 51

Query: 61  LLNATEISEYLSEAIYRAEMLAANALFLKNNSEENFGESEVLRTSLDEMVRKSVLGFDTI 120
           L  A+ I  +L   ++  E LA+    L    E N      L   +      SV   +  
Sbjct: 52  L-TASNIQSWLEGRMHLVEGLASQLALLDQPDEANIARQ--LEQPVFSRNFASVYLGEAA 108

Query: 121 EGAYLVFRPNMLDSEDSNYVNADYVGSNDIGQFAAYWTKAANGQNVISRVLTQAQLTEES 180
            GA+ + RP   D+    Y                                T+A   +  
Sbjct: 109 SGAFTM-RP--YDAMPEGYDPR-----------------------------TRAWYKDAL 136

Query: 181 NKERFVCPIEQASPCITSPRMVEFETGRYLATSLSVPILIDGVAIGFYGIDLTLAPLIGI 240
             +R +         +T P  V+  TG  +  ++S+P+   G  +G    D+ L  L  I
Sbjct: 137 AADRLI---------VTEP-FVDAGTGEQIL-AMSLPVRHAGQLLGVAAGDMKLETLTAI 185

Query: 241 TQKSDNNL-FDGQGKVSIVSENNALVASDAAFLTLGETFQSENLSRSTVSSLLQAGQVNT 299
                N+L FDG G   +VS+   ++    + L L    ++       +   +   +++ 
Sbjct: 186 L----NSLKFDGAGYAFLVSDAGKILLHPDSGLVLKTLAEAYPKGAPNIDPGVHEVELDG 241

Query: 300 QWSEDGQWLVVFAPIK-VANQNWGIIFEMPRQSVMQDAEQLDILLTEQLERGIRSELMVG 358
           +        V F P+K +    W +   + R +          +L+E      R+  +V 
Sbjct: 242 R-----SQFVSFTPVKGLPGVTWYVALVLDRDTAYS-------MLSE-----FRTSAIVA 284

Query: 359 TLMVVVGLLVVTLMAMR-LVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQLAQGFN 417
           TL+ VVG++++  M +R L++P+  +   +QDI+ GEGDLT+RL+V S DE G LA  FN
Sbjct: 285 TLIAVVGIMLLLGMLIRVLMQPLTDMGRAMQDIAQGEGDLTKRLRVTSNDEFGTLANAFN 344

Query: 418 LFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMTQTSA 477
            F++++   IR V     Q+    + V +   S+  +S+ Q    +SVA A  E+   + 
Sbjct: 345 RFVERIHESIREVAGTARQLHDVAQLVVNASNSSMANSDEQSNRTNSVAAAINELGAAAQ 404

Query: 478 HVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNTGIIE 537
            +  NA  A + ASDA   A+ G +V+  +   MN+L ++++ +   +E L      I +
Sbjct: 405 EIARNAADASHHASDANHQAEDGKQVVEQTIRAMNELSEKISASCANIEALNSRTVNIGQ 464

Query: 538 ILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRSVINK 597
           IL VI+GISEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA R Q S  +I+ +I +
Sbjct: 465 ILEVIKGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRAQESAQQIQKMIEE 524

Query: 598 VELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQDQQTV 657
           +++G ++ V  +  S   +  + E    A  +L  V S I  I+ M+  +  A ++Q  V
Sbjct: 525 LQVGAREAVATMTESQRYSLESVEIANRAGERLGSVTSRIGEIDSMNQSVATATEEQTAV 584

Query: 658 SAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705
              +   +  I  L+ + +   +A+ +   ++   +   + LV  FK+
Sbjct: 585 VDSLNMDITEINTLNQEGVENLQATLRACGELEAQAGRLRHLVDSFKI 632