Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., methyl-accepting chemotaxis protein from Pseudomonas aeruginosa PA14

 Score =  362 bits (928), Expect = e-104
 Identities = 223/720 (30%), Positives = 379/720 (52%), Gaps = 23/720 (3%)

Query: 1   MRQISVQWKITLLAGLCLVFTSLALIGFSIYNARASQQTAKLQSSESVIDKS-QQLLQTG 59
           M+  S+Q+ +  LAG  ++   + L+ ++++    +Q+  + Q ++ +++K   + L   
Sbjct: 1   MKLKSIQFSVAALAGASVLSVVVVLVLYALFAGARTQELVQ-QRTQGLLEKVINERLVAL 59

Query: 60  ALLNATEISEYLSEAIYRAEMLAANALFLKNNSEENFGESEVLRTSLDEMVRKSVLGFDT 119
           A    ++I   L   +     LA +   L     +   +    R  +  ++R +V     
Sbjct: 60  ARAQVSQIQRELEYPLTVVHGLANSTRLLGEPGADGMPQLNASRDEISALLRSTVQNNPK 119

Query: 120 IEGAYLVFRPNMLDSEDSNYVNADYVGSNDIGQFAAYWTKAANGQNVISRVLTQAQL--- 176
           +   ++ +  N  D+ D+ +      G    G++  +W + A+G+ ++  +         
Sbjct: 120 LLDTFMAWEANAFDT-DAAFAGQPGKGYGPDGRYLPWWYRGADGKPIVEAMADSIDSEKL 178

Query: 177 --TEESNKERFVCPIEQASPCITSPRMVEFETGRYLATSLSVPILIDGVAIGFYGIDLTL 234
             T     E + CP E   PCI  P   E      + +S +VPI++     G  G DL+L
Sbjct: 179 LPTGVRENEFYACPKENKRPCIIDPAPYEMGGKTVMMSSFNVPIMVGDQFRGAVGADLSL 238

Query: 235 APLIGITQKSDNNLFDGQGKVSIVSENNALVASDAAFLTLGETFQS-------ENLSRST 287
           A +  + +++D  L+DG G++++++ N  LVA       LGE   S       +NL   T
Sbjct: 239 AFIQDLLKRADQQLYDGAGEMALIASNGRLVAYTRDDSKLGEPAGSVLDSNEVDNLKNLT 298

Query: 288 VSSLLQAGQVNTQWSEDGQWLVVFAPIKVANQN--WGIIFEMPRQSVMQDAEQLDILLTE 345
           +   L         +E G  + +F P  +A+    W ++ ++P+ +V  + +QL   L++
Sbjct: 299 IDQPLYDID-----AEHGH-IELFLPFTIADSGVRWTLMLQIPQAAVFGELQQLQGELSD 352

Query: 346 QLERGIRSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNS 405
           Q ++ I    + G ++  +GLLVV L+   + RP+R +   L DI+ GEGDLT+RL    
Sbjct: 353 QRQQDILGMSLAGLVVAALGLLVVWLVGYGIARPLRQLVGMLDDIAQGEGDLTRRLSSER 412

Query: 406 ADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSV 465
           ADE+G +A+GFN F+ KLQ +I +VV +  +V  ++E        T +  + Q  E++ V
Sbjct: 413 ADELGSIAKGFNTFLGKLQNMIGQVVQSVQKVSDSSEHTADIAIRTNQGVQQQLAEIELV 472

Query: 466 ATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVV 525
           ATA  EMT T+  V  NA  A  AA+ A +AA  G +++  S   +  L   +  AV VV
Sbjct: 473 ATAVHEMTATAQDVARNATHAAEAANHADQAAHQGKQIVESSSAAIQALASEIGRAVGVV 532

Query: 526 EELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQ 585
           + LA+++  I  IL  I GI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ
Sbjct: 533 QNLAKDSENINAILVAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQ 592

Query: 586 ASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSH 645
            +  EI+S+I +++ GT+DVVK +Q S +    +      A   L  +  A+  IN+M+ 
Sbjct: 593 QATEEIQSMIQQLQQGTRDVVKVMQDSQDRTDDSVRHARQAAEALESITQAVSVINDMNT 652

Query: 646 QIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705
           QI  AA++Q  V+  + ++V NI  ++ Q+    + + +   ++ RL+ +Q+ LV QF+V
Sbjct: 653 QIASAAEEQSAVAEDINRNVANIGQVANQVAGGADEASQASAELTRLAEQQRRLVNQFRV 712