Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  229 bits (584), Expect = 3e-64
 Identities = 133/364 (36%), Positives = 209/364 (57%)

Query: 342 LLTEQLERGIRSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRL 401
           ++T+ +       L+   ++V +  +V+ + A R+V PI  + + L+DI+ GEGDLT+RL
Sbjct: 191 VMTKHMNDKAMMILLFALVLVAITAVVMLVAAQRMVNPIHNMVQNLEDIAKGEGDLTKRL 250

Query: 402 QVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKE 461
            V  +DEI  L + FN F+DKLQ II+ V   T +V S  + + S   +  +   +   E
Sbjct: 251 DVQGSDEIAMLGRAFNQFVDKLQGIIKDVARATVEVKSGADNISSQTAAMAQQLISHNNE 310

Query: 462 VDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLA 521
            D V TA  EM+ T++ V  +  +   A   A +      E +  S  +++ L+  +++A
Sbjct: 311 TDQVVTAITEMSATASEVAMSTTQVAEATQAATQDVGNAQECVDSSLHEVSTLMAEIDMA 370

Query: 522 VPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA 581
              +  L   +  I  +LSVI GI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA
Sbjct: 371 AGHINSLNEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA 430

Query: 582 SRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAIN 641
           SRTQAS  EI  +++++       V +++ S ++   +          L  V SA+ +IN
Sbjct: 431 SRTQASTLEINEMLSELHNLVSLAVSSMESSQQSCHRSVTSSRAISDSLGAVTSAVTSIN 490

Query: 642 EMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVG 701
           +MS QI  AA +Q +V+ ++ ++V  I+++  ++L  + ++    + +A       TLVG
Sbjct: 491 DMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLQASNSASDTSQGLANEGRNLDTLVG 550

Query: 702 QFKV 705
           QFKV
Sbjct: 551 QFKV 554