Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  225 bits (574), Expect = 4e-63
 Identities = 139/489 (28%), Positives = 257/489 (52%), Gaps = 24/489 (4%)

Query: 221 DGVAIGFYGIDLTLAPLIGITQKSDNNLFDGQGKVSIVSENNALV-ASDAAFLTLGETFQ 279
           DGV +G    D+ L  L  +      +  D  G V+++++    V AS++  L  G  F 
Sbjct: 165 DGVVLG----DIELTYLHDVV-----SAIDYPGAVALITDQTGKVLASESPTLVSGSRFS 215

Query: 280 SENLSRSTVSSLLQAGQVNTQWSEDGQWLVVFAPI--KVANQNWGIIFEMPRQSVMQDAE 337
              L +     ++ + +V  ++  DG   + F+     V  + W +   + + +     +
Sbjct: 216 DFGLPQ-VQQKIIGSDEVMQEYRIDGVDKLGFSKAIPLVNGKQWFLFIGLDKSNAYAVVD 274

Query: 338 QLDILLTEQLERGIRSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDL 397
           Q            + S L+   +M++  + ++  +   L RPI ++   + ++S G GDL
Sbjct: 275 Q-----------ALTSALVSSAIMLLCAISILLGVLYLLYRPILSLKAMVTELSKGNGDL 323

Query: 398 TQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEA 457
           T+RL+++  D++GQ++ G N F+  LQ ++R V+  +  +  + E++    E+ R    A
Sbjct: 324 TKRLEIHCEDDLGQISMGINQFIANLQAMMREVLQASAHISGSVERLNGETETNRHILSA 383

Query: 458 QFKEVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDR 517
             KE + +  A EEM+ T+  V +N     +        A    +V+  +   +N+LV  
Sbjct: 384 HTKETEQIVAAVEEMSATANDVAQNGSETASFTQLTNEQALASKQVVAQATETVNRLVRE 443

Query: 518 MNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEV 577
           +      + ++ R+   I ++L VI  I++QTNLLALNAAIEAARAGEQGRGFAVVADEV
Sbjct: 444 VEHTADKIGQIDRDTINITQVLKVIGDIADQTNLLALNAAIEAARAGEQGRGFAVVADEV 503

Query: 578 RSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAI 637
           R+LA+RTQ S  EI   ++ +   +   + +++ + +T   TA       T L+ + S++
Sbjct: 504 RALAARTQDSTAEIEETLSNLRDASNSAIHSMEVTKQTCLETASTTERVATDLDAIGSSV 563

Query: 638 HAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQ 697
           + IN+++ QI  AA++Q +VSA++T+++  I D++ ++    E+S      +A  + + +
Sbjct: 564 NQINDLNTQIATAAEEQSSVSAEITRNMSAICDMANELARSGESSRNETVNLATANQQLE 623

Query: 698 TLVGQFKVN 706
            +VGQFK++
Sbjct: 624 QIVGQFKLD 632