Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  238 bits (607), Expect = 7e-67
 Identities = 158/460 (34%), Positives = 248/460 (53%), Gaps = 25/460 (5%)

Query: 248 LFDGQGKVSIVSENNALVASDAAFLTLGETFQSENLSRSTVSSLLQAGQVN-TQWSEDGQ 306
           L D +G V + S+ + +  +  + L  G      N++R     LL  G    TQ   DG+
Sbjct: 202 LVDAKGDVKLHSDTSQIGKASLSSLYGG------NVTRE----LLNKGDFGLTQTELDGE 251

Query: 307 WLVVFAPIKVANQNWGIIFEMPRQSVMQDAEQLDILLTEQLERGIRSELMVGTLMVVVGL 366
            L+V A   + + +W ++ ++PR  V         LL E        +++V T+++    
Sbjct: 252 TLLV-ASSYIPSMDWYLVAQVPRAEVFA-------LLEESAY-----QILVWTVLIAAAF 298

Query: 367 L-VVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQLAQGFNLFMDKLQP 425
           + + T ++  + +PI  VA+ LQDI  GEGDL QRL V   DE+ QLA+GFN F++K+Q 
Sbjct: 299 IGLSTFVSASVSQPIAKVADMLQDIGQGEGDLRQRLPVEGNDELAQLAKGFNSFIEKIQH 358

Query: 426 IIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMTQTSAHVVENAQR 485
            I  V D + Q+    + V +  + T+  S+ Q  +   V TA  EM  T   +  NA +
Sbjct: 359 SIIEVTDTSVQLSHAAKDVANQAQQTQDDSQLQKDQTMMVVTAINEMGATVHEIAGNAAQ 418

Query: 486 AVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGI 545
           A + A DA  A+  G  V+  ++  +NQL   +     V+E LA + T I  IL VI  +
Sbjct: 419 AADNAKDADNASSNGQIVVTRARDTINQLSQDVEQVGNVIESLATHTTSIGSILDVIRAV 478

Query: 546 SEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRSVINKVELGTQDV 605
           S+QTNLLALNAAIEAARAGE GRGFAVVA+EVR+LASRT AS  E++ +I+ ++      
Sbjct: 479 SDQTNLLALNAAIEAARAGEAGRGFAVVAEEVRNLASRTAASTDEVQKMIDNLQSEAARA 538

Query: 606 VKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSV 665
           V+A+  S   +Q   + V +A   L  +   I AI +M+ Q+  A ++Q TV   + ++V
Sbjct: 539 VEAMTQSKSRSQEGVQAVDEASHTLTEISQQIGAITDMNIQVAAATEEQSTVVEDINRNV 598

Query: 666 VNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705
             I +++ +    ++A  +  + + +L+    TLV  FKV
Sbjct: 599 TEISEITQRTSETSQAVAQASQSLNQLAHRLDTLVAGFKV 638