Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  260 bits (665), Expect = 1e-73
 Identities = 201/724 (27%), Positives = 355/724 (49%), Gaps = 39/724 (5%)

Query: 1   MRQISVQWKITLLAGLCLVFTSLALIGFSIYNARASQQTAKL--QSSESVIDKSQQLLQT 58
           M+ +S+  K+  +    L  + +A++  S++    S+Q  +L  Q  E++  ++   L+ 
Sbjct: 1   MKHLSISTKLLWITS-ALFLSIVAILSISLWWT-LSEQNVELSHQVQETLQIETHDKLEA 58

Query: 59  GALLNATEISEYLSEAIYRAEMLAANALFLKNNSEENFGESEVLRTSLDEMVRKSVLGFD 118
            A      ++ +++EA YR     A  +       E+  E   L+    E+   +VL  +
Sbjct: 59  RAGEYGEMVAGFINEA-YRIPYSFAGIV-------ESTAEELPLKRDRLELAIAAVLKKN 110

Query: 119 T-IEGAYLVFRPNMLDSEDSNYVNADYVGS-NDIGQFAAYWTKAANGQNVISRVLTQAQL 176
           T I   Y  F  N  D  DS ++N +   S    G    Y+T+  +G     +V   ++ 
Sbjct: 111 TQISSMYAQFEANGYDGLDSEFLNVNVSHSVASSGVLEIYYTRNDDGTVEHHQVEDSSEK 170

Query: 177 TEES-------NKERFVCPIEQASPCITSPRMVEFETGRY-LATSLSVPILIDGVAIGFY 228
            + S         E ++C  E   PC+  P + E   G   L TSL+V  +     IG  
Sbjct: 171 YKTSLNEFGIRESEWYLCAKETLKPCLMEPYLYEITPGNTALMTSLTVSAVKHKQFIGVV 230

Query: 229 GIDLTLAPLIGITQKSDNNLFDGQGKVSIVSENNALVASDAAFLTLGETFQSENLSRSTV 288
           G+D+ L     +  K   +L+DGQ KV+++S    +VA  A+  +      +E++     
Sbjct: 231 GVDVNLPVFQVLIDKLSKSLYDGQAKVTLLSTRGLVVA--ASHYSKKARPLAESIDPKLA 288

Query: 289 SSLLQAGQVNTQWSEDGQWLVVFA-PIKVANQNWGIIFEMPRQSVMQDAEQLDILLTEQL 347
             ++   +     + D + +V +   I +AN  W +  ++P+   ++ +    ILL E++
Sbjct: 289 VQMIALHKNGGYMANDDEIIVAYPIDIPLANAEWSLAIQVPKSMALKSS----ILLNEKM 344

Query: 348 ERGIRSELMVGTLMVVVGLLV-------VTLMAMRLVRPIRAVAERLQDISSGEGDLTQR 400
           +    S   +G+++V+VGL V       ++++   ++ P+R +  R+++++S +GDLTQ 
Sbjct: 345 DDMATS---LGSILVIVGLAVSILAVVTISIVIRSVIAPLRLIQGRVENLASADGDLTQS 401

Query: 401 LQVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFK 460
           ++V+S  E+  L +GFN F+ KL+ +I  +    GQ    +       E TR S   Q+ 
Sbjct: 402 IEVDSHAELIALGKGFNSFIHKLKDLISELKALAGQTQEESLSSAKIAELTRDSVHRQYG 461

Query: 461 EVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNL 520
           E++SV TA  EM+ T+  V + +++         R     +E +  +   +  +      
Sbjct: 462 EIESVVTAVNEMSATALEVAKASEQTAAETEAMSRNVHLSEESLTKAMDYVTTMSQESMQ 521

Query: 521 AVPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSL 580
           A   V ++A ++T I  IL VI  I+ QTNLLALNAAIEAARAGEQGRGFAVVADEVR+L
Sbjct: 522 AKVAVSKVAESSTNISRILEVISSIAAQTNLLALNAAIEAARAGEQGRGFAVVADEVRAL 581

Query: 581 ASRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAI 640
           AS+TQ+S  +I  +I+ ++   Q     I    E AQ    Q   A+T LN + S I  I
Sbjct: 582 ASKTQSSTDDISVLIDALQKEVQSASAIIDKGAERAQMAVSQTEQALTSLNSMVSQIEEI 641

Query: 641 NEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLV 700
           +     I  AA++Q  V+ +V +++  I D ++++      +++    +A L  +Q   +
Sbjct: 642 SAQVTHIAAAAEEQSAVTEEVNRNITGISDSASELARLAGEAQQSSVVLAELVKQQHQQL 701

Query: 701 GQFK 704
           G+ K
Sbjct: 702 GKLK 705