Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  237 bits (605), Expect = 1e-66
 Identities = 141/376 (37%), Positives = 214/376 (56%), Gaps = 3/376 (0%)

Query: 330 QSVMQDAEQLDILLTEQLERGIRSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQD 389
           ++V++D  Q    +TEQ+       L++  ++      V+ + A R+V PI+ +A+ L D
Sbjct: 182 EAVVEDYRQT---VTEQMAEKSLMILLIALVLTGATAFVIMVAAHRMVVPIKNMADNLND 238

Query: 390 ISSGEGDLTQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVE 449
           I+ GEGDLT+RL V   DEI QL + FNLF+DKLQ II  V   T +V +    +    +
Sbjct: 239 IAKGEGDLTKRLSVKGEDEIAQLGRAFNLFVDKLQHIIGDVASATAKVKTAANAIHDQTK 298

Query: 450 STRRSSEAQFKEVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQM 509
                  +   E D V TA  EM+ T++ V +N  +   A   A          +  S  
Sbjct: 299 VMSSQLLSHNNETDQVVTAITEMSSTASEVAQNTTQVAEATQAATGDVANAQRCVDASLE 358

Query: 510 QMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRG 569
           ++  L++++N A   ++ L+  +  I  +LSVI GI+EQTNLLALNAAIEAARAGEQGRG
Sbjct: 359 EIAALMEQINHAAGSIKSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRG 418

Query: 570 FAVVADEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQ 629
           FAVVADEVRSLASRTQAS  EI  +++ +       VK +  S ++   + E        
Sbjct: 419 FAVVADEVRSLASRTQASTLEINEMLSALHKLVSQAVKTMDESQQSCVRSVESSRAISES 478

Query: 630 LNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQI 689
           L  V SA+ AIN+MS QI  AA +Q +V+ ++ ++V  I+++  ++L  +E + +V + +
Sbjct: 479 LGSVTSAVTAINDMSTQIATAATEQSSVTEEINRNVYAIQEIVNELLHSSEHAARVSQTV 538

Query: 690 ARLSFEQQTLVGQFKV 705
           ++       LVGQFK+
Sbjct: 539 SQEGTNLGNLVGQFKI 554