Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  267 bits (683), Expect = 1e-75
 Identities = 159/450 (35%), Positives = 254/450 (56%), Gaps = 14/450 (3%)

Query: 259 SENNALVASDAAFLTLGETFQSENLSRSTVSSLLQAGQVNTQWSEDGQWLVVFAP-IK-V 316
           +E + L+  D  F+  G TF ++  + S + S++Q  +V      +G+   ++   IK  
Sbjct: 196 AEISLLLPKDGGFVPFGGTFTTDTSAASELESVMQGDEVIRTIDLNGKSFALYRHGIKDY 255

Query: 317 ANQNWGIIFEMPRQSVMQDAEQLDILLTEQLERGIRSEL-MVGTLMVVVGLLVVTLMAMR 375
           + + +G++              LD   +EQ    IR +L M+G + +++G  +   +A  
Sbjct: 256 SGKTFGVL-----------DIALDRSHSEQAMSDIRLKLIMIGVIALLIGTAIAWFIAKS 304

Query: 376 LVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTG 435
           + RPI    + L DI+ GEGDLT+R++V S DE+ QLAQ FN F +K+   + +V D+T 
Sbjct: 305 ITRPIAETTDALNDIAEGEGDLTRRIEVKSKDEMAQLAQAFNRFAEKIHATVAQVSDSTS 364

Query: 436 QVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQR 495
            + ++ E++ +    T++ +  Q  E + VATA  EM  T   V  NA  A +AA+ A  
Sbjct: 365 LLATSAEEMSAITHETQQMANRQHLETEQVATAMNEMAATVQEVAHNATDAADAATHASE 424

Query: 496 AAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLALN 555
           + + G  ++      ++ L D +  A   + EL RN T I  +L VI  I++QTNLLALN
Sbjct: 425 STEQGKLLVEKVISTISLLADEIAQAANAINELERNTTQIDSVLVVIRNIADQTNLLALN 484

Query: 556 AAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNET 615
           AAIEAARAGEQGRGFAVVADEVR+LASRTQAS  EI+ +I  ++   +  V ++  S  T
Sbjct: 485 AAIEAARAGEQGRGFAVVADEVRTLASRTQASTTEIQQMIETLQQSAKATVSSMNTSTAT 544

Query: 616 AQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQI 675
            Q+    V +A + L  +  A+  I++M+ QI  AA +Q  VSA++ ++V NI D++   
Sbjct: 545 TQSCVSLVHEAGSALEAITQAVSTISQMNIQIASAANEQCAVSAEINKNVNNINDIATNA 604

Query: 676 LSETEASEKVGEQIARLSFEQQTLVGQFKV 705
                 + + G+++A+LS    TL+ QFK+
Sbjct: 605 TESAMQTARAGDELAQLSMRLTTLLSQFKI 634