Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  236 bits (601), Expect = 3e-66
 Identities = 137/363 (37%), Positives = 211/363 (58%)

Query: 343 LTEQLERGIRSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQ 402
           +TEQ+     + L++  L+  +   V+ + A R+V PI+ +A+ L DI+ GEGDLT+RL 
Sbjct: 192 VTEQMIDKSYAILLIALLLAAITAPVILVTAQRMVTPIKNMADNLNDIAKGEGDLTKRLA 251

Query: 403 VNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEV 462
           V   DEI QL + FNLF+DKLQ II  V   T +V +    +    +   R   +   E 
Sbjct: 252 VKGDDEIAQLGRSFNLFVDKLQTIIGDVAHATAKVKTAANAIHDQTKVMSRQLISHNNET 311

Query: 463 DSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAV 522
           D V TA  EM+ T++ V +N  +   A   A          +  S  +++ L+ ++N A 
Sbjct: 312 DQVVTAITEMSATASEVAQNTTQVAEATHAATGDVANAQRCVDASLEEISALMAQINNAA 371

Query: 523 PVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAS 582
             ++ L+  +  I  +LSVI GI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LAS
Sbjct: 372 SNIQSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAS 431

Query: 583 RTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINE 642
           RTQ+S  EI  +++++       VK ++ S ++   + +        L  V SA+ AIN+
Sbjct: 432 RTQSSTLEINEMLSELHKLVSLAVKTMEESQQSCIRSVDSSRAISESLGSVTSAVTAIND 491

Query: 643 MSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQ 702
           MS QI  AA +Q +V+ ++ ++V  I+++  ++L  +E +  V + +++       LVGQ
Sbjct: 492 MSTQIATAATEQSSVTEEINRNVFAIQEIVNELLHSSEEAASVSQTVSQEGLNLGKLVGQ 551

Query: 703 FKV 705
           FK+
Sbjct: 552 FKI 554