Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  238 bits (606), Expect = 8e-67
 Identities = 141/376 (37%), Positives = 216/376 (57%), Gaps = 3/376 (0%)

Query: 330 QSVMQDAEQLDILLTEQLERGIRSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQD 389
           ++V++D  Q    +TEQ+       L++  ++  +   ++ + A R+V PI+ +A+ L D
Sbjct: 182 EAVVEDYRQT---VTEQMADKSFMILLIALVLTGITAFIIMVAAHRMVVPIKNMADSLND 238

Query: 390 ISSGEGDLTQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVE 449
           I+ GEGDLT+RL V   DEI QL Q FNLF+DKLQ II  V + T +V S    +    +
Sbjct: 239 IAKGEGDLTKRLSVKGEDEIAQLGQAFNLFVDKLQTIIGDVANATAKVKSAANAIHDQTK 298

Query: 450 STRRSSEAQFKEVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQM 509
                  +   E D V TA  EM+ T++ V +N  +   A   A          +  S  
Sbjct: 299 VMSSQLLSHNNETDQVVTAITEMSSTASEVAQNTTQVAEATQAATGDVANAQRCVDASLE 358

Query: 510 QMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRG 569
           ++  L+ ++N A   ++ L+  +  I  +LSVI GI+EQTNLLALNAAIEAARAGEQGRG
Sbjct: 359 EIAGLMSQINNAAGSIKSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRG 418

Query: 570 FAVVADEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQ 629
           FAVVADEVR+LASRTQAS  EI  +++++       VK +  S ++   + +        
Sbjct: 419 FAVVADEVRNLASRTQASTLEINEMLSELHKLVSVAVKTMDESQQSCVRSVDSSRAISES 478

Query: 630 LNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQI 689
           L  V SA+ AIN+MS QI  AA +Q +V+ ++ ++V  I+++  ++L  +E + KV + +
Sbjct: 479 LGSVTSAVTAINDMSTQIATAATEQSSVTEEINRNVYAIQEIVNELLHSSEDAAKVSQTV 538

Query: 690 ARLSFEQQTLVGQFKV 705
           ++       LVGQFK+
Sbjct: 539 SQEGINLGKLVGQFKI 554