Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  267 bits (682), Expect = 2e-75
 Identities = 194/716 (27%), Positives = 356/716 (49%), Gaps = 23/716 (3%)

Query: 1   MRQISVQWKITLLAGLCLVFTSLALIGFSIYNARASQQTA-KLQSSESVIDKSQQLLQTG 59
           M+ +S+  K+  +    L  + +A++  S++   + Q T    Q  E++  +++  L+  
Sbjct: 1   MKHLSISTKLLWITS-ALFLSIVAILSISLWWTLSDQNTELSNQVQETLQTETRDKLEAR 59

Query: 60  ALLNATEISEYLSEAIYRAEMLAANALFLKNNSEENFGESEVLRTSLDEMVRKSVLGFDT 119
           A      ++ +++EA YR     +    L++ +EE   + + L  ++  +++K+    + 
Sbjct: 60  AGEYGEMVAGFINEA-YRIPYSFSG--MLESTAEELPLKRDRLELAVAAVLKKN----NQ 112

Query: 120 IEGAYLVFRPNMLDSEDSNYVNADYVGS-NDIGQFAAYWTKAANGQNVISRVLTQAQ--- 175
           I   Y  F PN  D  DS ++N +   S    G    Y+T+  +G    ++V   A+   
Sbjct: 113 ISSMYAQFEPNGYDGLDSEFLNVEVSHSVASSGSLEVYYTRNDDGTVEHNQVDDSAEKYV 172

Query: 176 --LTEESNKER--FVCPIEQASPCITSPRMVEFETGRY-LATSLSVPILIDGVAIGFYGI 230
             L E   +E   ++C  E   PC+  P + E   G   L TSL+VP++     IG  G+
Sbjct: 173 TTLNEFGIREAEWYLCAKETLKPCLMEPYLYEITPGNNALMTSLTVPVVKHKQFIGVVGV 232

Query: 231 DLTLAPLIGITQKSDNNLFDGQGKVSIVSENNALVASDAAFLTLGETFQSENLSRSTVSS 290
           D+ L     +  K   +L+DGQ KV+++S    +VA  A+  +      SE++     S 
Sbjct: 233 DVNLPVFQALIDKLSKSLYDGQAKVTLLSTRGLVVA--ASHYSKKARPLSESIDPKLASQ 290

Query: 291 LLQAGQVNTQWSEDGQWLVVFAPIKV--ANQNWGIIFEMPRQSVMQDAEQLDILLTEQLE 348
           ++   +     + D + +V + PIK+  A   W +  ++P+    + + +L+  + E   
Sbjct: 291 IVALHKNGGYMANDDEIIVAY-PIKIPLAKAEWSLAIQVPKAQAFKSSIELNDKMDEMAT 349

Query: 349 RGIRSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNSADE 408
                 LMVG  + ++ ++ ++++   ++ P++ +  R++ ++S +GDLTQ + V++  E
Sbjct: 350 SLGSILLMVGLAVSILAVVTISIVIRSIIAPLKMIQGRVEHLASADGDLTQSIVVDAHAE 409

Query: 409 IGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATA 468
           +  L +GFN F+ KL+ +I  +    G+    +       E T  S   Q+ E++SV TA
Sbjct: 410 LIALGKGFNSFIHKLKDLISELKTLAGRTQEESLSSAQIAELTHDSVHRQYGEIESVVTA 469

Query: 469 AEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEEL 528
             EM+ T+  V + +++         R  +  +E +  +   +  +      A   V ++
Sbjct: 470 VNEMSATALEVAKASEQTAAETEAMSRNVRLSEESLTKAMEYVTTMSQESMQAKVAVSKV 529

Query: 529 ARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASV 588
           A ++T I  IL VI  I+ QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LAS+TQ+S 
Sbjct: 530 AESSTNISRILEVISSIAAQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASKTQSST 589

Query: 589 GEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIV 648
            +I  +I+ ++         I    E AQ    Q   A+T LN + S I  I+     I 
Sbjct: 590 DDISVLIDALQQEVNSASGIIDKGAERAQMAVSQTEQALTSLNSMVSQIEEISSQVTHIA 649

Query: 649 QAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFK 704
            AA++Q  V+ +V +++  I D ++++      +++    +A L  +Q   +G+ K
Sbjct: 650 AAAEEQSAVTEEVNRNITGISDSASELARLAGEAQQSSVVLAELVKQQHQQLGKLK 705