Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  233 bits (594), Expect = 2e-65
 Identities = 156/497 (31%), Positives = 263/497 (52%), Gaps = 22/497 (4%)

Query: 213 SLSVPILIDGVAIGFYGIDLTLAPLIGITQKSDNNLFDGQGKVSIVSENNALVASDAAFL 272
           +++ P+ + G   G    +LT+  L    Q+       G+G   +V +   +++   + L
Sbjct: 152 TIAEPVTVSGSLFGVAAANLTIDQLTDAVQRLQ---VPGKGYTIMVDKTGLIISHPKSQL 208

Query: 273 TLGETFQSENLSRSTVSSLLQAGQVNT--QWSEDGQWLVVFAPIKVANQNWGIIFEMPRQ 330
              +  + +N    T S L Q    NT  +   DG+  +++    V + +W ++F M + 
Sbjct: 209 NNEQLNKIDN--SFTPSWLSQRANANTLEERELDGETQLIYVAA-VPSTDWELVFVMNKD 265

Query: 331 SVMQDAEQLDILLTEQLERGIRSELMVGT-LMVVVGLLVVTLMAMRLVRPIRAVAERLQD 389
            +M  A  L   ++            VG  L+V+ GL++V +  ++  + +  VA  L D
Sbjct: 266 EIMSQATTLAWWMSA-----------VGAGLLVIFGLVLVAIFKIQF-KDLERVALALND 313

Query: 390 ISSGEGDLTQRLQV-NSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTV 448
           I+ G+GDLT R+   NS DEIG LA GFN F+++L  +I R+    GQ+    +   ++ 
Sbjct: 314 IAEGDGDLTVRIHTANSHDEIGILASGFNRFVERLHGMISRMHKIAGQLEYQAQGSSASA 373

Query: 449 ESTRRSSEAQFKEVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQ 508
               +    Q  EV  VATA  EM   +  +  NA+     A DA   +  G + +  SQ
Sbjct: 374 TDNSQRIAVQQDEVTMVATAVTEMASATEEIASNAEHTAQTAQDAVGLSNHGQKQVMQSQ 433

Query: 509 MQMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGR 568
             +  L + +  A  ++ EL  ++  I  IL  I GI+EQTNLLALNAAIEAARAGEQGR
Sbjct: 434 QSIRNLANEVETAGRIISELNEHSQKINSILLTISGIAEQTNLLALNAAIEAARAGEQGR 493

Query: 569 GFAVVADEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVT 628
           GFAVVADEVR L+ RT +S  EI+++I  ++      VK++  S++ A+ +      A  
Sbjct: 494 GFAVVADEVRVLSQRTHSSTQEIQAMIETLQQTAGKAVKSMTQSHDMAETSVADANSASE 553

Query: 629 QLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQ 688
            L ++  AI+ I++M+ QI  AA++Q +V++++ ++  +IR++S  +  E ++S    ++
Sbjct: 554 SLLQISKAINEISDMASQIATAAEEQTSVTSEINRNTESIREVSENLSIEAQSSMVQAQE 613

Query: 689 IARLSFEQQTLVGQFKV 705
           +A L+   Q  VG+FK+
Sbjct: 614 LAHLAASLQQEVGRFKL 630